Rhodococcus sp. PBTS 1: A3Q40_00734
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Entry
A3Q40_00734 CDS
T05182
Symbol
recD_2
Name
(GenBank) RecBCD enzyme subunit RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
rhu
Rhodococcus sp. PBTS 1
Pathway
rhu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A3Q40_00734 (recD_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhu03400
]
A3Q40_00734 (recD_2)
Enzymes [BR:
rhu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A3Q40_00734 (recD_2)
DNA repair and recombination proteins [BR:
rhu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A3Q40_00734 (recD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
RecD_N
UvrD-helicase
AAA_22
SH3_13
Helicase_RecD
PSII_Pbs31
PhoH
AAA_24
TraI_hel_assoc_N
SLFN-g3_helicase
Tautomerase-like
UvrD_C
AAA_16
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
AMY18142
UniProt:
A0A143Q6K7
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All DBs
Position
808964..810844
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AA seq
626 aa
AA seq
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MNDRDRYPASVAQRGKGLLRVFDEAGVLTAADVHVALRLGKLGGESDEFALFAVALAVRA
VRAGSVCLDMTRLRDVTADEDVDLDALPWPDDAAVLDAVRRSPLVLGSEAGPLRPILLID
TADGPLLYLQRYYLQERTIRDVLADRARSAPDVDVDAVAAALDRFFPGSEPPDRQRIAAA
VAATAWTTVIAGGPGTGKTHTVARILALLQSLYGSHLRLGLAAPTGKAAARLRESVETQS
EELGLRNVPGAMTVHRLLGWRPGRSRFRHDAHNRLPYDVVVVDETSMVSSTMMSRLLAAM
RSDARLILVGDPDQLTSVDAGAVLADLVARPVTGAVPDAVTRLTARDLADTLPGDGTERA
LGTRERERLAAGIVRLSRGRRFGGAIADLAVAVRDGDADTVIDILRAQPPGIEFHPDSAA
DAVDRDVVATARSVLAAAEVGDAASALDALERHRTLCAHREGPYGVRHWSARAAERIGAD
RGSFLDEDTWYVGRPLLITVNDHDNRVYNGDTGVVVSDGDGGVLAAFARGDRPLTVHPSR
LSSAVSVHAMTIHRSQGSQYDTVSVVLPDDRSSLLTRELLYTAVTRARKVVRVLGSEEAV
RSGVGRRVLRASGLRRDPGTPVGREA
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgaccgagaccgctacccggcgtcggtcgcgcaacgcggcaagggtctcctccgc
gtcttcgacgaggcgggcgtgctcaccgccgcggacgtccacgtggccctgcggctgggc
aagctcggcggcgagtccgacgagttcgccctgttcgccgtggcgctcgccgttcgggcc
gtccgcgccggatcggtgtgcctcgacatgacccgactgcgcgacgtcacggcggacgag
gacgtggacctcgacgcgctgccctggccggacgatgccgccgtgctggacgccgttcgt
cgcagtccgctggtcctcgggagcgaggccggaccgctccggcccatcctgctgatcgac
accgccgacggtcctctgctctacctccagcggtactacctgcaggaacgcaccattcgt
gacgtcctcgcggaccgcgcgcgcagcgcaccggacgtcgacgtcgacgcggtggcggcg
gcgctcgaccggttcttccccggcagcgagccgcccgatcggcaacggatcgccgcggcc
gtcgccgccacggcgtggacgacggtgatcgccggcggtccgggcaccggaaagacgcac
accgtggcgcgcatcctcgcgctgctgcagtcgctgtacgggtcgcacctgcgtctcggt
ctcgccgcgccgaccgggaaggcggcggcgcgattgcgcgagtccgtcgagacccagagc
gaggagctgggtctgcggaacgtgcccggcgcgatgacggtgcatcgactgttggggtgg
cgtcccggccgcagccggttccgacacgacgcacacaaccgtctgccctacgacgtcgtg
gtcgtcgacgagacctcgatggtgtcctcgacgatgatgagcaggctcctggccgcgatg
cggagcgatgcccgactgatcctggtgggcgacccggaccaactcacctcggtcgatgcg
ggtgcggtgctggccgacctcgtcgcccgtcccgtgacgggtgcggtgccggacgcggtg
acgcgtctgactgcgcgcgacctggccgacacactgccgggggacgggacggaacgcgcg
ctcggcacgcgcgagcgtgagcgactggccgcgggcatcgtgcgcttgagtcgcggtcgc
cggttcggcggtgccatcgccgatctcgccgtggccgttcgcgacggtgacgccgacacc
gtgatcgacattctccgcgcgcagccgccgggcatcgagttccaccccgattcggccgcg
gacgcggtggaccgagacgtggtcgccaccgcgcgttcggttctcgccgcggccgaggtc
ggtgacgccgcgtcggcgctggacgcgctcgagcggcaccgcactctgtgtgcgcaccgc
gagggcccgtacggcgtccggcactggtccgcgcgggcggccgagcggatcggggccgac
cgcgggtccttcctcgacgaggacacctggtacgtggggcgcccgctgttgatcaccgtg
aacgatcacgacaaccgggtctacaacggtgacaccggggtggtggtgagcgacggcgac
ggcggggtactcgcggccttcgcccgcggcgaccgcccactcaccgtgcaccccagccgc
ctgtccagcgccgtcagcgtgcacgccatgaccattcatcgatcgcagggaagtcagtac
gacaccgtgtcggtggtgcttccggacgacaggtcctcgctcctcacccgcgaattgctc
tacacggcggtgacccgtgcccggaaggtcgtccgcgttctcgggtcggaggaggccgtg
cgcagcggcgtgggacgccgagtgctccgggccagcggactccgacgcgacccgggaacg
cccgtggggcgtgaggcctga
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