Rhodococcus sp. PBTS 1: A3Q40_00787
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Entry
A3Q40_00787 CDS
T05182
Symbol
rapA_2
Name
(GenBank) RNA polymerase-associated protein RapA
Organism
rhu
Rhodococcus sp. PBTS 1
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
AMY18195
UniProt:
A0A143Q4F3
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Position
862999..865893
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AA seq
964 aa
AA seq
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MLHGLWTPGSGLLLWQDVSGSPENGTDGDGTDGGEGHEDLPPFLARVMARRLRHTASVTM
PPDGGAADRVESMPAAALAPMEAADLLRRVPLVHPALSGDLRYLAAVTRGLERWTRAGRV
VPHQVRLENRWWLRWRLLGDEHQRGWRAELLSAMPPVQRAEGDPAAVLDDLIGELTDPVV
RHVLGRPDAAHPLLVALVEEEPYDDGSTRSEQALDRWRESLQGEDAALVLRLVEPDDLDQ
DADLDIGDGASALWRLEVLVRPDGEAPQPVSLRPGAGVADATRFRSAVRALAEAVGAYPP
LASVVTAPGSLDLLLPTEKVLDFVVSGVHAVQSVGVDVLLPREWARVDTSMRLAVDAPPS
PTTKDSAVGLDRLVEYDWQVAVGDMVLTPQEMSRLASSKADLVRVRGKWVHADGAVLARA
IDYVERHRAPGSVPLASALGQLAAAEPPPAPVTDVAATGWVAALLDGDRRPEPVVVPPSV
RATLRPYQERGVQWLAFMSSLGLGAILADDMGLGKTVQILVLLASEREATPPEGRRPTLV
VAPMSVVGNWAREAATFVPDLAVHVHHGAGRVTGDDLQAVIAASDLVVTTYALLARDVAA
LSAARWRRVVLDEAQHVKNSGTAQARAARAVPAEHRIALTGTPVENRLEELRSIVDFCNP
GLLGGAAVFRARFAVPIEREGDQHALARLRSLTAPFVLRRVKTDKAVIADLPDKFEMTVR
TNLTAEQASLYQAVVDETMRQIDEAEGMERKGAVLAALTRLKQVCNHPAHFLADGSTVLR
RGRHRSGKVALVEDILDSVLGDGEKALVFTQFAAFGRMVAPYLAERFDVEVPFLHGGVSK
RGRDEMVARFQSSDGPPILLATVKAGGTGLTLTAANHVVHLDRWWNPAVENQATDRAFRI
GQRRDVQVRKLVCVGTLEERIDEILTDKAGLADLAVGSGENWLTEMSTGELRTLLSLSDE
AVGE
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
gtgctccacggactctggacccccggctcggggctgctgctgtggcaggacgtttcgggc
tcaccagaaaacggcaccgacggggacggcaccgacgggggtgaggggcacgaggatctg
cccccgttcctcgcccgcgtcatggcgcgccgcctgcgccacaccgcctcggtgaccatg
cccccggatggcggcgcggcggatcgggtggagtcgatgccggcggccgccctcgctccg
atggaagcggccgatctgctgcgccgggtgccgctcgtgcatcccgcgctgtccggcgac
ctgcgatatctggccgcggtcacccgcggcctcgaacggtggacgcgtgcgggtcgggtg
gtgccgcaccaggtgcgactcgagaaccgatggtggctgcgctggcggctgctcggcgac
gagcaccagcggggctggcgggccgaactgctctcggccatgccgccggtccaacgagcc
gagggtgatcctgccgcggtgctcgacgatctgatcggcgaactcaccgatccggtggtg
cgccacgtcctcggccggccggacgcggcgcatccgctgctcgtggcgctcgtcgaggag
gagccgtacgacgacgggtcgacgcgatccgagcaggctctcgaccggtggcgggagagt
ctgcagggcgaggatgccgctctggtcctgcggctcgtggaaccggacgatctcgatcag
gacgccgatctcgacatcggggacggtgcgtccgccctgtggcggctcgaggtcctcgtc
cggcctgacggcgaagcgccgcaaccggtctcgctccggccgggcgccggtgtcgccgac
gccacccggttccgcagtgcggtgcgcgcactcgccgaggcggtgggtgcctacccgccg
ctcgcgtcggtcgtcaccgcgccgggctcgctggatctgctgctgcccaccgagaaggtg
ctggatttcgtcgtgtccggtgttcacgccgtgcagagcgtcggcgtcgacgttctgctg
ccgcgggaatgggcgcgcgtcgacacctcgatgcggctggccgtcgacgccccgccgtcg
cccaccacgaaggactcggcggtggggctcgaccggttggtcgagtacgactggcaggtg
gccgtcggcgacatggtgttgacgccgcaggagatgtcccgcctcgcgtcgtcgaaggct
gatctggtgcgggtgcgcggcaagtgggtgcacgccgacggcgccgtgctggctcgggcc
atcgactacgtcgagcggcatcgtgcgccgggatcggtgccgctggcgtcggcgctcgga
cagctcgccgccgccgaaccgccgccggcgccggtcacggacgtcgccgcgaccggttgg
gtcgccgctctgctcgacggtgaccgccgtcccgagccggtcgtcgtcccgccgtccgtg
cgggcgacgctgcggccgtaccaggagcggggcgtgcagtggctcgcgttcatgagttcg
ctcggactgggggcgatcctcgccgacgacatggggctggggaagaccgtgcagatcctg
gtgctgctggcctcggaacgcgaggccacgccgccggagggtcgtcggccgacgctcgtg
gtggccccgatgtcggtggtgggcaactgggctcgcgaagcggcgacgttcgtgccggac
ctcgccgtccacgtccaccacggcgcgggtcgcgtcacgggggacgatctgcaggcggtg
atcgccgcgtccgacctggtcgtcaccacctacgcgctgctcgcccgcgacgtcgccgcg
ttgtcggcggcgcggtggcggcgtgtggtgctcgacgaggcgcagcacgtcaagaacagc
gggacggctcaggcgcgcgcggcgcgcgccgttccggccgagcaccgcatcgcgctgacc
ggaacaccggtggagaaccggctcgaggagttgcggtcgatcgtcgacttctgcaatccg
gggttgctgggcggcgcggcggtgttccgggctcggttcgcggtgccgatcgagcgcgag
ggcgatcagcatgccttggctcgattgcgttctctcaccgcgccgttcgtgctgcggcgg
gtgaagacggacaaggcggtcatcgcggatctgccggacaagttcgagatgaccgtgcgc
accaacctcacggcggagcaggcgagcctctaccaggccgtggtggacgagacgatgcgg
cagatcgacgaggcggagggcatggaacgcaagggtgctgtcctggcggcgctgacccgg
ctcaagcaggtgtgcaaccacccggcgcatttcctggcggacgggtcgacggtgctgcga
cggggccggcatcgatccgggaaggtggcactggtcgaggacattctcgattccgtactc
ggcgacggggagaaggcgttggtgttcacgcagttcgctgccttcggccggatggttgcg
ccgtacctggcggagcggttcgacgtcgaggtgccgttcctgcacggcggggtgagcaag
cgcggccgggacgagatggtcgcacggttccagtcgagcgacgggccgccgatcctgctg
gcgacggtgaaggcgggcggaaccgggctgacgctcacggcggcgaaccacgtcgtccac
ctggatcggtggtggaacccggcggtggagaaccaggccaccgaccgggcgttccgcatc
ggtcaacgccgagacgtccaggtgcgcaagctcgtctgcgtcggcacgctcgaggagcgg
atcgacgagatcctcacggacaaggccggactcgcggatctggccgtgggcagcggggag
aactggctcaccgagatgtcgaccggagagctccgaaccctgctgtcgctctccgacgag
gcggtgggcgagtga
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