Rhodococcus sp. PBTS 1: A3Q40_00801
Help
Entry
A3Q40_00801 CDS
T05182
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rhu
Rhodococcus sp. PBTS 1
Pathway
rhu00300
Lysine biosynthesis
rhu00470
D-Amino acid metabolism
rhu01100
Metabolic pathways
rhu01110
Biosynthesis of secondary metabolites
rhu01120
Microbial metabolism in diverse environments
rhu01230
Biosynthesis of amino acids
Module
rhu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rhu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
A3Q40_00801 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
A3Q40_00801 (lysA)
Enzymes [BR:
rhu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
A3Q40_00801 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AMY18208
UniProt:
A0A143Q698
LinkDB
All DBs
Position
878335..879702
Genome browser
AA seq
455 aa
AA seq
DB search
MPDRPTAAAEVTDLDPTVFPRNARRREDGVVTLAGVPVTDLAREFGTPLFVIDEDDFRSR
CREMAAAFGAPARVHYASKAFLCGEIARWVADEGLSLDVCSGGELAVALNAGFPANRIAM
HGNNKSREELAAGVRAGVEHVVLDSMAEIGRLDEIAAAANTVQDVLIRITVGVEAHTHEF
IATAHEDQKFGFSLSDGSAMQAVRRVFDAANLRLVGLHSHIGSQIFEVDGFELAAHRVIG
LLGQIRAEFGVEKTSQIDVVDLGGGMGIRYLPGDNPPPVDDLAAKLTEIVRSESAAIGIE
PPTLAVEPGRAIAGPGTVTLYEVGTVKDVTVEPGRTRRYISVDGGMSDNIRTSLYQAEYV
GRLVSRESDGDPVLARIVGKHCESGDIVIRDTWQPNDLDDGDLFAVAATGAYCYSMSSRY
NLLPRPAVVAVRGGEARTVLRRETFDDLLSLEVDR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatcgtccgacggccgccgccgaggtgaccgatctcgacccgaccgtgttcccg
cgcaacgcccgtcggcgagaggacggtgtggtcaccctcgccggggtgccggtcaccgac
ctcgctcgggagttcggcacaccgctattcgtgatcgacgaggacgacttccggtcgcgc
tgccgcgagatggcggccgccttcggggcgccggcccgagttcactacgcctccaaggct
ttcctgtgcggtgagatcgcgcgctgggtcgccgacgagggcctgtcgctcgacgtctgc
tccggcggcgagttggccgtggccttgaacgcgggcttcccggcgaaccggatcgccatg
cacggcaacaacaagtcccgcgaggagctggccgccggtgtgcgcgccggcgtcgagcac
gtggtcctggattccatggcggagatcggccgactcgacgagatcgccgcggccgcgaac
acggtgcaggacgtgttgattcgcatcaccgtgggcgtcgaggcgcacacgcacgagttc
atcgccaccgcgcacgaggaccagaagttcggcttctcgctgtccgacggcagtgcgatg
caggcggttcgtcgagtgttcgacgccgcgaacctccgtctggtgggcctgcattcgcac
atcgggtcgcagatcttcgaggtcgacggcttcgagctcgcggcccaccgggtcatcggg
ctgctcgggcagatccgcgccgagttcggggtggagaagacctcgcagatcgacgtcgtc
gatctcggcggcggcatgggaattcggtacctgccgggggacaacccgccccccgtggac
gatctggccgccaagctgaccgagatcgtgcggtcggagtcggcggcgatcggcatcgaa
ccgccgacgctcgccgtggagcccggtcgcgccatcgccggccccggcaccgtgacgctg
tacgaggtgggcacggtcaaggacgtcaccgtcgagcccggccgcacgcgccgctacatc
agcgtcgacggcggtatgagcgacaacatccggacctcgctctaccaggcggagtacgtg
ggtcgtctcgtctcgcgcgagtccgacggcgatccggtcctggctcgcatcgtcggaaag
cattgcgagagcggcgacatcgtcattcgcgatacgtggcagccgaacgacctggacgac
ggcgacctgttcgcggtggccgcgacgggcgcgtactgctattcgatgtcgtcccgctac
aacctcttgccccgaccggccgtcgtcgccgtgcgcgggggcgaagcccgaacggtgctc
cgccgtgaaacgttcgacgacctgctcagcttggaggtagaccggtga
DBGET
integrated database retrieval system