Rhodococcus sp. PBTS 1: A3Q40_00960
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Entry
A3Q40_00960 CDS
T05182
Symbol
ssb_1
Name
(GenBank) Single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
rhu
Rhodococcus sp. PBTS 1
Pathway
rhu03030
DNA replication
rhu03430
Mismatch repair
rhu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A3Q40_00960 (ssb_1)
03430 Mismatch repair
A3Q40_00960 (ssb_1)
03440 Homologous recombination
A3Q40_00960 (ssb_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhu03032
]
A3Q40_00960 (ssb_1)
03400 DNA repair and recombination proteins [BR:
rhu03400
]
A3Q40_00960 (ssb_1)
03029 Mitochondrial biogenesis [BR:
rhu03029
]
A3Q40_00960 (ssb_1)
DNA replication proteins [BR:
rhu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
A3Q40_00960 (ssb_1)
DNA repair and recombination proteins [BR:
rhu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
A3Q40_00960 (ssb_1)
TLS (translesion DNA synthesis) factors
Other SOS response factors
A3Q40_00960 (ssb_1)
Mitochondrial biogenesis [BR:
rhu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
A3Q40_00960 (ssb_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSB
Motif
Other DBs
NCBI-ProteinID:
AMY18358
LinkDB
All DBs
Position
1037462..1037941
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AA seq
159 aa
AA seq
DB search
MNDVWTTVVGTVITDPIKRTTQAGDEVLGFRVASNSRRQDRATGDWIDGDTLYASVSCWR
RLVSGVGASLMKGDPVIVYGRARTSEYTTKEGVGRSGLEITATAVGPDLSRCQATLQRPR
RDTVPAESDAGEPADVDGPPDLTEDEADVHRDAVPTPVG
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgtctggacgacggtggtgggcaccgtcatcaccgatccgatcaagcgcacc
acgcaggccggggacgaggtgctcggcttccgggtggccagcaactcgcgccggcaggac
cgggcgacgggggactggatcgacggagacacgctctacgcgtcggtgtcctgctggcga
cgactggtctcgggcgtgggggcctcgctgatgaagggcgacccggtgatcgtctacgga
cgcgcccgcaccagcgagtacaccaccaaggagggggtgggccggtccggtctcgagatc
accgcgacggccgtcgggccggacctctcgcgctgccaggccaccctgcagcggccgcgg
cgcgacaccgtcccggccgagtccgacgcgggcgaacccgccgacgtggacggccccccg
gacctcaccgaggacgaggccgacgtgcatcgggacgccgttccgacgccggtcgggtag
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