Rhodococcus sp. PBTS 1: A3Q40_01023
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Entry
A3Q40_01023 CDS
T05182
Symbol
recQ_1
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rhu
Rhodococcus sp. PBTS 1
Pathway
rhu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A3Q40_01023 (recQ_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhu03019
]
A3Q40_01023 (recQ_1)
03400 DNA repair and recombination proteins [BR:
rhu03400
]
A3Q40_01023 (recQ_1)
Enzymes [BR:
rhu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A3Q40_01023 (recQ_1)
Messenger RNA biogenesis [BR:
rhu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A3Q40_01023 (recQ_1)
DNA repair and recombination proteins [BR:
rhu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A3Q40_01023 (recQ_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_22
KORA
Motif
Other DBs
NCBI-ProteinID:
AMY18419
UniProt:
A0A143Q662
LinkDB
All DBs
Position
complement(1110104..1112188)
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AA seq
694 aa
AA seq
DB search
MSTRERAQELLADLAGPSAVLRDDQWTAIEALVVHKRRALVVQRTGWGKSAVYFIAARML
REQGLGPTVIVSPLLALMRNQVAAAEHAGVTAATINSGNVTEWDDVHARVAAGELDVLLV
SPERLNNPDFRDQVLPSLSADAGLVVVDEAHCVSDWGHDFRPDYRRIRSLIAELRDGVPV
LATTATANDRVVADVAAQLGVGGADTEVLRGGLGRDSLHLAVVRIPDPTARLAWLADRLE
SLPGSGIVYSLTVAGATDLAALLAERGVAVAAYTGQTDPTEREAAEQDLLANRVKALVAT
SALGMGFDKPDLGFVVHVGAPSSPISYYQQVGRAGRATERAEVILLPGPEDREIWSYFAS
VAFPREHVVRRVLEVLDTERPQSTPALEPLVELGRTRLEMVLKVLDVDGAVRRVKGGWLS
TGAEWTYDRERYERLDAARAAEQQAMLDYQTTDECRMAFLRRQLDDPSLTGDADVDRCGK
CDNCTGTPLSADVDAETVDRTRTRLDRPGLDLAPRKQWPTGLAKVGVSLSGRITDGPEPG
RVLGRLTDPVWGPRLRALVDGDDGPAPDALEQACIAVLAGWTWAERPTGVVVMETSRPVL
MEDLGDRLARVGRLAPLGVLRRRPDARPVSGANSAFRVASLVDAFDTPDLTAHDGPVLLL
DLLTDTGWTTTVAARALRAAGADAVLPFVLAARA
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
gtgagcactcgcgagcgcgcgcaggaattgctcgcggatctggccggcccgtcggcggtg
ctccgggacgatcagtggacggccatcgaggcgctggtggtgcacaagcgacgcgccctg
gtggtccagcgcaccggctggggcaagtccgccgtctacttcatcgccgcgcggatgctg
cgcgagcaggggctcgggccgacggtcatcgtctccccgttgttggcgctcatgcgcaac
caggtggcggccgccgagcacgccggtgtcacggcggcgaccatcaactcgggcaacgtc
accgagtgggacgacgtgcatgcccgcgtcgcggccggggagctcgacgtgctcctcgtc
agcccggaacggttgaacaatccggactttcgtgaccaggtgctgccctcgctgtccgcc
gatgccggtctcgtggtggtggacgaggcgcactgcgtgtccgactgggggcacgacttc
cggcccgactaccgccgcatccgctccctgatcgccgaactgcgtgacggggttcccgtg
ctcgccaccaccgccacggccaacgaccgggtcgtcgccgacgtcgctgcgcagctgggc
gtgggcggtgccgacaccgaggtgctgcgcggcggtctcggccgcgactccctccacctc
gcggtggtgcgcattccggaccccaccgctcgtctcgcgtggctggccgaccggctcgag
tcgctcccgggttcgggcatcgtgtactcgctgaccgtcgccggcgccaccgacctcgcg
gcactgctggccgagcggggtgtcgccgtcgccgcgtacacgggccagaccgaccccacc
gagcgcgaagcggcggaacaggatctgctggcgaaccgcgtgaaggcactggtggccacc
tcggccctcggcatgggattcgacaagccggacctcgggttcgtggtccacgtgggggcg
ccgtcctcccccatctcgtactaccagcaggtcggtcgcgccggccgcgccaccgagcgc
gcggaggtgatcctgctgcccggcccggaggaccgggagatctggagctacttcgcctcg
gtcgcgtttccccgcgaacacgtggtgcgccgtgttctcgaggtgctcgacaccgagcga
ccccagtccaccccggcgctcgaacccctcgtcgaactcggccgcacccgtctcgagatg
gtcctcaaggtgctcgacgtcgacggcgccgtgcgccgcgtcaagggcgggtggctctcg
acgggtgccgagtggacgtacgaccgcgagcgctacgagcgtctcgacgcggcgcgcgcc
gccgagcagcaggccatgctggactatcagaccaccgacgagtgccgcatggccttcctg
cggcggcagctcgacgacccgtcgctcaccggtgacgccgacgtcgatcgctgcgggaag
tgcgacaactgcacgggcaccccgctgtcggcggacgtcgacgccgagaccgtcgaccgc
acccgtacccggctggaccgccccggtctcgatctcgccccgcgcaagcagtggcccacc
gggctggccaaggtgggggtgtccctctcgggccgcatcaccgacgggcccgagcccggc
cgcgtgctcggccggctcaccgatccggtgtggggaccgcgactgcgagccctcgtggac
ggcgacgacggtccggcgcccgacgcgctcgagcaggcctgcatcgcggtcctcgccggg
tggacctgggcggagcgtcccaccggagtcgtggtgatggagacgtcgcggcccgtgctg
atggaggacctcggcgaccgactcgcccgcgtcgggcgactggcgcccctcggcgtgctg
cgtcgccgcccggacgcccggcccgtgtcgggtgccaactccgcgttccgggtggcgagc
ctggtcgacgcgttcgacacccccgacctgacggcgcacgacgggcctgtcctgctcctc
gacctgctcaccgacaccgggtggaccaccacggtcgccgcccgtgctctgcgcgcggcc
ggggcggacgccgtcctccccttcgtgctggcggcgcgggcgtga
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