Rhodococcus sp. PBTS 1: A3Q40_01072
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Entry
A3Q40_01072 CDS
T05182
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
rhu
Rhodococcus sp. PBTS 1
Pathway
rhu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A3Q40_01072 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhu03400
]
A3Q40_01072 (recO)
DNA repair and recombination proteins [BR:
rhu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A3Q40_01072 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A3Q40_01072 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF7573
DUF3724
Motif
Other DBs
NCBI-ProteinID:
AMY18468
LinkDB
All DBs
Position
1165006..1165809
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AA seq
267 aa
AA seq
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MRSYRDHAVVLREHKLGEADRIVTLLTRDHGLVRAVAKGVRRTTSKFGARLGPFAHIDVQ
LYPGRNLDIVTQVQTVNAFGADIVADYARYTTGCAILETAERLAGEEHAPAPRLHSLTVG
ALRTLGSGERPPELVLDAFLLRAMNFAGWAPSLTECATCSAPGPLRAFHVAAGGAVCTQC
RPAGAATPGVGVLDLMAALQSGDWPAAVATADSVRTQASGLVAAHLQWHLERQLRTLPLV
ERGAPADRTVGQDETRDPSSRAADPVR
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
gtgaggtcctaccgggatcacgccgtcgtcctgcgtgaacacaagctcggcgaggccgat
cgcatcgtcacgctgttgacgcgggaccacgggctggtgcgcgccgtggccaagggcgtg
cgccgcacgacctcgaagttcggcgcccggctcggaccgttcgcgcacatcgacgtccag
ctgtatccgggccggaacctcgacatcgtcacccaggtgcagacggtgaacgccttcggc
gccgacatcgtcgccgactacgcccgctacaccaccggctgcgcgatcctcgagacggcg
gagcggctcgccggcgaggaacacgcccccgctccgcggctgcactcgctgaccgtcggc
gcgctgcgcaccctcggctccggggagcggccaccggagttggttctcgacgccttcctg
ttgcgcgccatgaacttcgccgggtgggcgccgtcgctcaccgagtgcgcgacgtgctcg
gcgcccggcccgttgcgggcgttccacgtggccgccggcggtgcggtgtgcacgcagtgc
cggccggccggggcggcgactccgggcgtcggcgtcctcgacctcatggccgccctgcag
agcggcgactggcccgcggccgtcgcgacggcggactcggtgcggacacaggcgagcggc
ctggtggccgcgcacctgcaatggcacctcgagcggcaactgcgaaccctgccgctggtc
gagcgcggtgcccccgcggacaggaccgtcgggcaggatgagacccgtgatccgtcgtcg
cgagcagccgaccccgtccgatag
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