Rhodococcus sp. PBTS 1: A3Q40_01101
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Entry
A3Q40_01101 CDS
T05182
Symbol
gmr
Name
(GenBank) Cyclic di-GMP phosphodiesterase Gmr
Organism
rhu
Rhodococcus sp. PBTS 1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAF
GAF_3
GAF_2
Motif
Other DBs
NCBI-ProteinID:
AMY18495
UniProt:
A0A143Q5D1
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All DBs
Position
complement(1196979..1198808)
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AA seq
609 aa
AA seq
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MELSPSLDVLVTRVATHLIGADAPTAPSAYRAGLRDLRDWFGVDTVFLRHHDSHHRITTL
VAEWPQREHVPDPDPLGIVEFAGADPVFAATEHLQEPLVFRPGSPARAYAERVESASGMS
SVSMVAVPLRSGPATTGVLGLVAAGDRQWTEDELGALKATASLFSQVQARVSAEERLRWA
ARHDALTGLLNRRGMADELSARLAEGRPRFAVLYFDLDRLEALNDVLGHTAGDEFLRTVA
ERLRRFTDDDSLLCRWGGDEFVLLLPRATTEDEAYVEACGLLMSVTARVELAGDVVSRTA
SIGVAVARPGIDTVDSVIAGADQAAIAAKSAGGNAVSLFTDEIRERTALRNDIELHLRAA
IENDALLLHFQPEIDLTTGRITAVEALVRWLHPTRGMIPPADFVGIAESVNLATELGRWV
LNEACRTYASWRQRLGESTITLRVNVSPAQLVSRDFIGVVETTLARHAMSPADLCIEITE
VAVVHDVTLAARTLAAVRALGVRVAIDDFGTGYSSLSHLKTLPVDAVKIDREFVAHLDTD
ADDRAIVGAVVTLATAYRLDLIAEGLETVEARTALLDLGCTRAQGYLYARPEPAEVVFDM
LRVGTLTPS
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggagttgtcgccgagcctcgacgtcctggtcacccgcgtcgccacccacctcatcggg
gcggacgcgcccacggctccgtccgcctaccgcgccggtctgcgtgacctccgggattgg
ttcggcgtcgacacggtcttcctccgccaccacgattctcaccaccgaatcaccacgctc
gtcgccgaatggccccagcgcgagcacgttccggatccggatccgctcggaatcgtggag
ttcgccggggccgatccggtgttcgcggccaccgagcatctgcaggagccgttggtgttc
cggccggggtcacccgcgcgggcctacgcggagcgggtcgaatcggcgtcgggcatgagt
tcggtgtcgatggtggccgtgccgctgcgatcgggtccggccaccaccggcgttctcggg
ttggtggccgcgggcgatcgccagtggaccgaggacgagctcggcgcactcaaggccacc
gcctccctgttctcgcaggtccaggcacgggtgtccgccgaggaacgtctgcgctgggcc
gcgcggcacgacgccctcaccggcctgctcaaccggcggggtatggccgacgagctgtcc
gccaggctcgcggaagggcgcccccgcttcgcggtgctctacttcgacctggaccgcctc
gaagccctcaacgacgtgctgggccacaccgccggtgacgagttcctgcgcaccgtcgcc
gaacgtctgcgccggttcaccgacgacgactccttgttgtgccgctggggcggagacgaa
ttcgtgctgctgcttccccgcgccacgaccgaggacgaggcgtacgtcgaggcgtgcggc
ctgctgatgtcggtgaccgctcgggtcgaactcgccggcgacgtcgtctcgcgcaccgcc
agtatcggggtggccgtcgcgcggcccggcatcgacaccgtcgactcggtcatcgcgggc
gcggatcaggccgcgatcgcggcgaagagcgcaggcggcaacgcggtctcgctgttcacc
gacgagattcgcgaacgcacggcgctgcgcaacgacatcgagctgcacctgcgcgccgcc
atcgagaacgatgcgctgctgctgcacttccagcccgagatcgacctgaccaccgggcgg
atcacggccgtcgaggcgctcgtgcggtggctgcacccgacgcgcggcatgattccgccc
gccgacttcgtcggcatcgccgagtcggtcaacctggccaccgaactcggtcggtgggtg
ctgaacgaggcgtgccggacctacgcgtcgtggcggcagcgactgggcgagtcgaccatc
accctccgggtgaacgtctcaccggcccaactggtgtcgcgggacttcatcggcgtcgtg
gagacgaccctcgcccgccacgcgatgtcccccgcagacctgtgcatcgagatcaccgag
gtggccgtcgtgcacgacgtcacgctcgccgcccgcaccctcgcggccgtgcgcgcgttg
ggagttcgtgtggcgatcgacgacttcggtaccggctacagctcgctctcgcacctgaag
acgttgcccgtcgacgcggtgaagatcgaccgcgagttcgtcgcccatctggacaccgac
gccgacgatcgcgccatcgtcggcgccgtcgtcaccctcgccacggcgtaccgactcgac
ctcatcgccgagggcctcgaaaccgtcgaggcccgcacggcgttgctcgatctcggctgc
acccgcgcgcagggctacctctacgcgcgtcccgagcccgccgaggtcgtcttcgacatg
ctgcgcgtcgggaccctgacaccgtcctga
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