Rhodococcus sp. PBTS 1: A3Q40_01316
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Entry
A3Q40_01316 CDS
T05182
Name
(GenBank) hypothetical protein
KO
K03530
DNA-binding protein HU-beta
Organism
rhu
Rhodococcus sp. PBTS 1
Brite
KEGG Orthology (KO) [BR:
rhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhu03032
]
A3Q40_01316
03036 Chromosome and associated proteins [BR:
rhu03036
]
A3Q40_01316
03400 DNA repair and recombination proteins [BR:
rhu03400
]
A3Q40_01316
DNA replication proteins [BR:
rhu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
A3Q40_01316
Chromosome and associated proteins [BR:
rhu03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
A3Q40_01316
DNA repair and recombination proteins [BR:
rhu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
A3Q40_01316
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AMY18706
LinkDB
All DBs
Position
1428413..1429156
Genome browser
AA seq
247 aa
AA seq
DB search
MNKAELIDALTEKTGADRRSATDAVENIVDIIVRAVHRGDSVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAVIAGGQKLAATGPAVKRGAAAAAKKTAAAKKTT
AAKKTTAAKATATKAPAKTAAKKTTAAPAKTAAKKTTATKAPAKTAAKKTTATKAPAKTA
AKKTTATKAPAKTAAKKTTAAKSTASKSTAAKKTTTAAKKTTAAAKKSAPAKKAPAKKAP
AKRTARK
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcagaactgatcgacgccctgaccgagaagaccggcgcggaccgtcgcagc
gccaccgatgccgtcgagaacatcgtcgacatcatcgtgcgtgcggtgcaccgcggtgac
tcggtgacgatcaccggcttcggcgtcttcgagcagcgtcgccgcgcagctcgggtcgcg
cgcaacccgcgcaccggtgagacggtcaaggtcaagccgacgtcggttcccgccttccgc
ccgggcgctcagttcaaggccgtcatcgccggtgggcagaagctcgccgccaccggccct
gccgtcaagcgtggtgccgccgctgccgcgaagaagaccgcggccgcgaagaagaccacc
gcggcgaagaagacgacggcggcgaaggccaccgcgaccaaggcgcccgccaagaccgct
gccaagaagaccactgcggcaccggccaagacggcggccaagaagaccaccgccaccaag
gcgccggccaagaccgcagcgaagaagaccaccgccaccaaggcaccggccaagaccgca
gcgaagaagaccaccgccaccaaggcaccggccaagaccgcagcgaagaagaccaccgcc
gcgaagtcgacggcgagcaagtccacggcggccaagaagaccaccaccgctgcgaagaag
accaccgcggcagcgaagaagtcggcaccggccaagaaggcacccgccaaaaaggccccg
gccaagcgcaccgcccgcaagtag
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