KEGG   Rhodococcus sp. PBTS 1: A3Q40_01335
Entry
A3Q40_01335       CDS       T05182                                 
Symbol
rnc
Name
(GenBank) Ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
rhu  Rhodococcus sp. PBTS 1
Pathway
rhu03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:rhu00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    A3Q40_01335 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rhu03019]
    A3Q40_01335 (rnc)
   03009 Ribosome biogenesis [BR:rhu03009]
    A3Q40_01335 (rnc)
   03036 Chromosome and associated proteins [BR:rhu03036]
    A3Q40_01335 (rnc)
Enzymes [BR:rhu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     A3Q40_01335 (rnc)
Messenger RNA biogenesis [BR:rhu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     A3Q40_01335 (rnc)
Ribosome biogenesis [BR:rhu03009]
 Eukaryotic type
  90S particles
   RNase
    A3Q40_01335 (rnc)
 Prokaryotic type
  rRNA processing factors
   A3Q40_01335 (rnc)
Chromosome and associated proteins [BR:rhu03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     A3Q40_01335 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM
Other DBs
NCBI-ProteinID: AMY18725
LinkDB
Position
1448443..1449225
AA seq 260 aa
MTDQITTPSPESGESEHASLLAALGVSVHPELLELALTHRSYAYEHGGLPTNERLEFLGD
SVLGLSITEKLYTTHPDKSEGELAKIRASVVNMHALAEVARGLGDGGLGAHLRLGKGEEM
TGGRDKPSILADGMESLLGAIHVQHGIDTAREVVLRLFEDLLERGPRLGAGLDWKTSLQE
LTAVKGLGVPVYEISATGPDHDKEFTATVLVGGTPFGAGVGRTKKEAEQRAAGTAWNDLS
DGAAAVPAGGVGTAPTAPGV
NT seq 783 nt   +upstreamnt  +downstreamnt
gtgaccgaccagatcacgacgccgtcgcccgagagcggtgagagcgagcacgcatcgctt
ctcgccgctctcggcgtttcggtgcaccccgaacttctcgaactggcgctgacccaccgt
tcgtacgcgtacgagcacgggggtctgcccaccaacgagcgcctcgaattcctcggtgac
tcggtgctggggctgtcgatcaccgagaagctctacaccacgcacccggacaagtccgag
ggcgagctggccaagatccgcgccagcgtggtcaacatgcacgccctcgccgaggtcgcc
cgcggtctcggcgacggcggcctcggtgcgcacctgcgcttgggcaagggcgaggagatg
acgggcggacgggacaagccgtccattctggccgacgggatggaatccctgctcggtgcg
atccacgtccagcacggcatcgacacggcacgcgaggtggtcctgcgcctgttcgaggac
ctgctcgagcgtggtccacgtctgggtgccggactcgactggaagaccagcctgcaggaa
ctcaccgcggtgaagggtctgggtgtgccggtctacgagatctccgcgaccgggccggac
cacgacaaggagttcaccgccacggttctcgtcggcggcacccccttcggtgccggtgtc
ggccggaccaagaaggaagccgagcaacgcgctgccggcaccgcgtggaacgacctgtcc
gacggggccgcggcggtgcccgcgggcggcgtcggtaccgcgccgaccgcccccggggtc
tga

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