Rhodococcus sp. PBTS 1: A3Q40_01336
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Entry
A3Q40_01336 CDS
T05182
Symbol
fpg1
Name
(GenBank) Formamidopyrimidine-DNA glycosylase 1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rhu
Rhodococcus sp. PBTS 1
Pathway
rhu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A3Q40_01336 (fpg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhu03400
]
A3Q40_01336 (fpg1)
Enzymes [BR:
rhu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A3Q40_01336 (fpg1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A3Q40_01336 (fpg1)
DNA repair and recombination proteins [BR:
rhu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A3Q40_01336 (fpg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
TackOD1
Auto_anti-p27
IBR_1
Motif
Other DBs
NCBI-ProteinID:
AMY18726
UniProt:
A0A143Q744
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All DBs
Position
1449233..1450117
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AA seq
294 aa
AA seq
DB search
MPELPEVEVVRRGLDDHVVGSVLHRVEVLHPRAARRHELGSLDLEARLAGTEVRAVDRRG
KYLWLVVAPPGGDLARAEAIVVHLGMSGQMLVQPTTAPAEKHLRIRVDLGDDRELRFVDQ
RTFGGWAVADLVDSGGSLVPVPVAHIARDPLDPLFDVEQVVATMRGKHTEIKRALLDQTV
VSGVGNIYADESLWRSKIHGARLTDSLTRPALRRVLHHAHAVMGEALAQGGTSFDALYVN
VNGQSGYFDRSLAAYGQEGLPCPRCGAPIRREKFMNRSSFSCPRCQPRPRVRRA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctgcccgaggtcgaggtcgtacggcgtggtctggacgatcacgtcgtcggt
tccgtgttgcaccgcgtcgaggtgcttcatccgcgcgcggcgcggcggcacgagctcggc
agcctggacctcgaggcccggctcgccggaaccgaggtgcgcgcggtcgatcggcgcggc
aagtatctctggctggtggtcgcgccccccggcggcgacctcgcgcgcgccgaagccatc
gtggtccacctcggtatgagcggacagatgctcgtgcagcccaccaccgcgcccgccgag
aagcacctgcgcatccgcgtcgacctcggtgacgaccgcgaactgcgcttcgtcgatcaa
cgcaccttcggtgggtgggccgtggcggatctggtcgattccgggggcagcctggtgccc
gtgccggtcgcgcacatcgcgcgcgatccgctggatccgctgttcgacgtcgagcaggtg
gtggcgacgatgcgcggcaagcacaccgagatcaaacgtgccctgctcgaccagaccgtc
gtctcgggcgtcggcaacatctacgccgacgagtcgttgtggcgcagcaagattcacggt
gcccgcctgaccgattccctcacccggccggccctgcggcgggtgctgcaccacgcccac
gccgtgatgggggaggccctggcccagggcggcacgtcgttcgatgcgctctacgtcaac
gtcaacggccagtccgggtacttcgatcggtccctcgccgcctacgggcaggagggcctg
ccgtgcccgcgttgcggcgcccccatccggcgggagaagttcatgaaccgctcgtccttc
agctgcccccggtgtcagccccgtccgcgggtgcggcgcgcgtaa
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