Rhodococcus sp. PBTS 1: A3Q40_01421
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Entry
A3Q40_01421 CDS
T05182
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rhu
Rhodococcus sp. PBTS 1
Brite
KEGG Orthology (KO) [BR:
rhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhu03016
]
A3Q40_01421 (truB)
Enzymes [BR:
rhu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
A3Q40_01421 (truB)
Transfer RNA biogenesis [BR:
rhu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A3Q40_01421 (truB)
Prokaryotic type
A3Q40_01421 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
BBS2_CtH
Motif
Other DBs
NCBI-ProteinID:
AMY18811
UniProt:
A0A143Q7R4
LinkDB
All DBs
Position
1540587..1541504
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AA seq
305 aa
AA seq
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MPDHTPPPSGLDGAGLLVVDKAGGVTSHDVVSACRKALRTRRVGHAGTLDPMATGVLVLG
VERATKILGLLSLTTKEYTATIRLGSATTTDDAEGDVVSRGDVATVRDDAVDDAVAALTG
DIEQVPSSVSAIKIDGRRAHALVREGETVVIPARPVTVSRFEILRRRRSDEAIDLDVHVE
CSSGTYVRALARDLGAALGVGGHLTALRRTRVGPFTLEHARTLDEVRADPHVSLDIDAAV
ATAFPRRDISAAEAESLSQGRWLDPVGMAGVYAAVGPDGRTVALVQERGKRAGSVMVVRP
ATLGT
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaccacactccaccgccctccggactcgacggtgccggcctgctcgtcgtcgac
aaggccggtggtgtcaccagccacgacgtggtgtcggcctgccgcaaggcgttgcgcacc
cgccgagtcggtcatgcagggaccctcgatcccatggcgacgggggtgctggtgctcgga
gtggagcgcgcgaccaagatcctgggcctgctctcgctcaccacgaaggagtacacggcg
acgatccgtctcggcagcgccaccacgacggacgacgccgagggcgacgtcgtctcacgc
ggtgacgtcgccaccgtccgcgacgacgccgtcgacgacgccgtggcggcgctgaccggc
gacatcgagcaggtgccgtcgagcgtcagtgccatcaagatcgacgggcgtcgggcgcac
gcgctggtccgggagggcgagaccgtcgtcatcccggctcggcccgtcacggtctcgcgg
ttcgagatcctgcgacgtcgacggtccgacgaggcgatcgatctcgacgtgcacgtggag
tgctcgtcgggaacgtacgtgcgggccctcgcccgtgacctcggagccgcgctcggtgtc
ggcggccatctgacggccctgcggcgcacccgcgtcggtccgttcacgctcgagcacgcg
cgcactctcgacgaggtgcgcgcggatccgcacgtgagtctcgacatcgacgccgcggtg
gcgacggccttcccgcgccgcgacatctcggcggcggaggcggagtcgctcagccaggga
cggtggctcgaccccgtggggatggccggtgtctacgcggcggtggggccggacgggcgc
acggtggccctggtgcaggagcgcggcaagcgggcgggctccgtgatggtggtccgcccg
gcgactctcggcacttag
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