Rhodococcus sp. PBTS 1: A3Q40_01579
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Entry
A3Q40_01579 CDS
T05182
Name
(GenBank) putative lipoprotein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rhu
Rhodococcus sp. PBTS 1
Pathway
rhu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A3Q40_01579
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhu02000
]
A3Q40_01579
Transporters [BR:
rhu02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
A3Q40_01579
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
MSG_insertion
Motif
Other DBs
NCBI-ProteinID:
AMY18965
UniProt:
A0A143Q6U1
LinkDB
All DBs
Position
1702670..1704361
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AA seq
563 aa
AA seq
DB search
MTRGTRRLVAGAAAVVVAVSAAACSTEEDRVPSIGYAVNGPITTYNAGSTEGAYSAARQA
LSRVLPGFSMIGPGGTAVADTDIGTVTEVPGQQQVLTYAFAPAAVWSDGVPMTCDDLVLA
WAARRGTTETSGTAFDAAETAGYSDIERIDCVPSQKEATVTFRADRPLVDRESLFGPGTI
LPAHVAARTAGVPDVTSTLAGGDADAVGRLAEAWNTGWTLPSGAVDPAVFAASGPFRVES
FSADDGLVLVPNDNWWGVPAQTDRIVVWPSGIDLAEKASSGDLEVVDLPGGAAAPDGFTA
AAQPSFGVEQLIFATSGVFVDPAARRAVASCVPRTALFDAHGHPGYDAETGRGSGVVDSR
VMLPGTLPYRSVAAVAADRYRTTDVAAVTAGLAQAGLTDPTVRIGYRGPDSRRAAIVADI
AAACGPLGVDVVDASSDTLSPLALRAGEVDVLLAGTAGGFGPTGTATPGSARTALLGGQN
VNLGGYANGRVDELLNRLAVDGSDATALSAGTDVERILWDDLPTLPLWNVPVVTATASGM
RGVDANPSVAGAGWNMDKWVFVR
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgacccggggaacgagacgtctggtcgccggagcggccgcggtcgtcgtcgcggtgtcc
gcggcggcgtgcagcaccgaggaggatcgcgtcccgtccatcggttacgccgtgaacggg
ccgatcaccacctacaacgcgggctccaccgagggcgcgtattcggcggcgcgtcaggcg
ctctcccgcgttctccccgggttctcgatgatcgggccggggggaaccgcggtcgccgac
accgacatcggcaccgtcaccgaggttcccggccaacaacaggtcctgacctacgcgttc
gccccggcagccgtctggtccgacggggtccccatgacgtgcgacgacctcgtgctcgcc
tgggcggcgcgacgcgggaccaccgagacgtcgggcaccgcgttcgacgccgccgagacc
gccgggtactccgacatcgagcgcatcgactgcgtgccctcgcagaaggaggccacggtc
accttccgggccgatcgccccctcgtcgaccgtgaatccctgttcggtcccggcaccatc
ctgccggcgcatgtcgccgcgcggaccgcgggcgttccggacgtcacctcgaccctcgcg
ggcggcgacgccgacgccgtcggtcgcctcgccgaggcctggaacaccggatggaccctg
ccgtccggcgcggttgaccccgccgtcttcgccgcgtcgggtccgttccgcgtcgagtcg
ttctccgcggacgacggcctggtcctcgtgcccaacgacaactggtggggcgtcccggcc
cagaccgaccgcatcgtggtgtggccgtccgggatcgacctggccgagaaggcgagctcg
ggcgacctcgaggtcgtggatctgcccggaggcgccgccgcacccgacgggttcaccgcc
gcggcccagccgagcttcggcgtcgagcagctgatcttcgcgacgtcgggagtgttcgtc
gaccccgccgcccgccgcgccgtcgcctcgtgcgtgccgcgcacggcgttgttcgacgcc
catgggcaccccggctacgacgccgagaccggccgcggatccggtgtcgtcgacagccgg
gtgatgctgcccggcacgctgccgtaccgcagtgtggccgcggtggccgccgaccggtac
cgcaccaccgacgtcgccgccgtgacggccggtctcgcgcaggccgggctcaccgacccg
accgtgcgcatcggctaccgcggacccgactcgcgtcgtgccgcgatcgtggccgacatc
gccgccgcgtgcgggccgctgggagtcgacgtcgtcgacgcctcctcggacaccctctcg
ccgctcgctctgcgcgcgggcgaggtcgacgtgctgctcgccgggaccgccggcgggttc
ggcccgaccggcaccgcgacgccggggtccgctcggacggcgctgctcggcgggcagaac
gtcaacctcggcgggtatgcgaacgggcgtgtcgacgaactgctgaaccgtctcgccgtg
gacggctcggacgccacggcgctgtcggcggggacggacgtcgagagaatcctctgggac
gacctgccgacgttgccgctgtggaacgtgcccgtcgtcaccgcgaccgcgtccggcatg
cgtggggtcgacgccaacccgagtgtcgccggagcaggatggaacatggacaaatgggtc
ttcgtccgatga
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