Rhodococcus sp. PBTS 1: A3Q40_01727
Help
Entry
A3Q40_01727 CDS
T05182
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
rhu
Rhodococcus sp. PBTS 1
Brite
KEGG Orthology (KO) [BR:
rhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rhu03051
]
A3Q40_01727 (pafA)
Enzymes [BR:
rhu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
A3Q40_01727 (pafA)
Proteasome [BR:
rhu03051
]
Prokaryotic proteasome
Bacterial regulatory particles
A3Q40_01727 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
AMY19112
LinkDB
All DBs
Position
1870379..1871722
Genome browser
AA seq
447 aa
AA seq
DB search
MGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGSHPEYA
TAECDSLEQLVAHDRAGERVLEDLLIDAEQRLSDEGIGGDIYLFKNNTDSAGNSYGCHEN
YLVVRAGEFSRISDVLLPFLVTRQLICGAGKVLQTPKAAAFCLSQRAEHIWEGVSSATTR
SRPIINTRDEPHADAEKYRRLHVIVGDSNMAEPTTMLKVGSAALVLEMIEAGVSFRDFAL
DNPIRAIREVSHDPTGRRPVRLAGGRQASALEVQREYHARAVEHLRNRTPDVRMEQVVDL
WGRTLDAVEAQDFAKVDTEIDWVIKRKLFERYQDRYSMDLSDPKIAQLDLAYHDIKRGRG
VFDVLQRKGLVTRITEDAAIDEAVDTPPQTTRAKLRGEFIAAAQNAGRDFTVDWVHLKLN
DQAQRTVLCKDPFRSVDERVERLIASM
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggggatcgagacggagttcggtgtcacgtgcacgttccacggacatcgtcgactcagc
ccggacgaggtggcgcgctatctcttccggcgcgtggtgtcgtgggggcgcagttccaac
gtgttccttcgcaacggtgcgcggctctacctcgacgtcgggtcgcaccccgagtacgcc
acggccgagtgcgattcgctcgagcaactggtcgcgcacgatcgggccggggagcgggtc
ctcgaggacctgctgatcgacgccgagcagaggttgtccgacgagggcatcggcggcgac
atctacctgttcaagaacaacaccgactcggcgggcaactcgtacggctgccacgagaac
tacctcgtcgtccgcgcgggggagttctcccgcatctcggacgttctgctgccgttcctc
gtcacgcgccagctgatctgcggcgccgggaaggttctgcagaccccgaaggcggctgcg
ttctgcctgtcccagcgcgcggagcacatctgggaaggcgtctcctcggccaccacgcgg
tcccggcccatcatcaacacgcgcgacgaaccgcacgccgacgccgagaagtaccgccgg
ctgcacgtgatcgtcggcgactcgaacatggccgagcccaccaccatgctcaaggtcggc
agcgccgcgctggtcctcgagatgatcgaggcgggcgtgtccttccgagacttcgcgctg
gacaaccccatccgcgccatccgcgaggtctcgcacgatccgaccggtcgacggccggtg
cgcctggccggcggacggcaggcaagtgcgctcgaggtgcagcgcgagtaccacgcacgg
gccgtcgagcacctgcgcaaccgcacgcccgacgtgcggatggaacaggtcgtggacctg
tggggccgcaccctcgacgcggtcgaggcccaggacttcgccaaggtcgacaccgagatc
gactgggtcatcaagcgcaagctgttcgagcgctaccaggaccggtactcgatggacctc
tcggatccgaagatcgcgcagctcgacctcgcgtaccacgacatcaagcgcggccggggc
gtcttcgacgtcctgcaacgcaaaggcctggtcacccggatcaccgaggacgccgcgatc
gacgaggccgtggacacaccgccgcagacgacgcgcgccaagctgcggggggagttcatc
gccgccgcccagaacgccgggcgcgacttcaccgtcgactgggtgcacctcaagctcaac
gaccaggctcagcgcaccgtgctgtgcaaggacccgttccggtccgtcgacgagcgggtc
gaacggctcatcgcctccatgtga
DBGET
integrated database retrieval system
