Rhodococcus sp. PBTS 1: A3Q40_01964
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Entry
A3Q40_01964 CDS
T05182
Symbol
uvrD2
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhu
Rhodococcus sp. PBTS 1
Pathway
rhu03420
Nucleotide excision repair
rhu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A3Q40_01964 (uvrD2)
03430 Mismatch repair
A3Q40_01964 (uvrD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhu03400
]
A3Q40_01964 (uvrD2)
Enzymes [BR:
rhu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A3Q40_01964 (uvrD2)
DNA repair and recombination proteins [BR:
rhu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A3Q40_01964 (uvrD2)
MMR (mismatch excision repair)
Other MMR factors
A3Q40_01964 (uvrD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AMY19340
UniProt:
A0A143Q8A8
LinkDB
All DBs
Position
complement(2138643..2140760)
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AA seq
705 aa
AA seq
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MTATDAVEGLDPEQSAAVLAPRGPVCVLAGAGTGKTRTITRRIAHLVSGGHVKPSQVLAV
TFTARAAGEMRERLRLLGIANDGGQVQARTFHAAAMRQLKYFWPQVVGTTEWRLLDRKFG
VVGQAASAAGASTSTDSIRDLAGEIEWAKASLVAPQDYAATVARLRRDTPTDADRVAAVY
EGYEQLKNRDPDAVLLDFDDLLLHTAAALETSPAVAQEFRERYRCFVVDEYQDVTPLQQR
VLDAWVGERDDLTVVGDANQTIYSFTGATPKYLLDFSRRFPEATVVRLERDYRSTPQVVE
LANQVIGAARGRIAGTRLQLVGQRPTGPAPTFVEYDDEVSEAAGVARTVQRLIRDGVRPS
EIAVLYRINAQSEAHEQALTDLEIPYQVRGGESFFQRADVRSAVTAIRSAAARDDLPEDA
RRGPGMVRFVEAVLAPQGLTATEPTGAQAREKWAALRALVSLTTDLLEQVPELDLDGLLA
ELRTRAEARHPPTVEGVTLASLHAAKGLEWDAVFLVGLVDGTLPISHALGDSSSAPDEAA
VEEERRLLYVGVTRARVHLELSWALARNEGGRKSRRRSRFLVDLVPESSPASRIAAPAPT
RKRPVCRVCGSPVIGTVATMLGRCEKCPSDVDVPLLEALREWRSATSKTLKVPAYVVFSD
NTLTAIAEQRPRDDRSLVAIPGIGAKKLERFGADVLAIVGERATR
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcaaccgacgccgtggaaggactcgaccccgagcagtcggctgccgtactggcc
ccccgcggccccgtgtgcgtgctcgccggcgccggaacgggcaagactcggaccatcacc
cgccggatcgcccatctggtgtcgggtggccacgtcaaaccgagccaggtgctggcggtc
acgttcaccgcccgcgcggccggggagatgcgtgagcgcctgcgtctgctgggcatcgcg
aacgacggcggccaggtgcaggcgcggacgttccacgctgcggccatgcgtcagctcaag
tacttctggccgcaggtcgtgggcaccacggagtggcggttgctcgaccgcaagttcggc
gtggtcggccaggcggcgtcggccgccggagcctcgacctcgacggacagcatccgggac
ctcgccggggagatcgagtgggccaaggcctccctggtcgccccgcaggactacgccgcc
acggtggcgcggttgcgccgggacacgccgacggacgcggaccgggtggccgcggtgtac
gaggggtacgagcagctcaagaaccgggatcccgacgccgttctgctcgatttcgacgat
ctcctgctgcacaccgcggccgcgctcgagaccagcccggcggtggcacaggagttccgc
gagcgctaccgctgcttcgtggtcgacgaataccaggacgtcacgccgctgcagcagcgc
gtgctcgatgcatgggtgggcgagcgggacgatctcacggtggtcggtgacgcgaaccag
accatctactccttcaccggggccaccccgaagtacctcctcgacttctcccgtcgcttc
ccggaggccaccgtggtccggctcgagcgggactaccgctccacgccccaggttgtcgaa
ctggccaatcaggtcataggggccgcgcgtggccgtatcgccggcacccgcctgcaactg
gtgggtcagcgtccgacggggccggcgccgacattcgtcgaatacgacgacgaggtgtcg
gaggccgccggtgtcgcgcggaccgtgcagcgcttgattcgtgacggtgtgcggccgtcc
gagatcgcggtgctctatcgcatcaacgcccagtccgaggcgcacgagcaggcgttgacc
gatctcgagatcccgtaccaggtgcggggcggggagagcttcttccagcgtgcggacgtg
cgctcggccgtaacggccattcggtccgcggcggcgcgtgacgaccttccggaggacgcg
cgtcgggggccgggcatggtgcgcttcgtcgaggccgtgctggccccgcaggggctgacg
gccaccgagcccaccggcgcgcaggcgcgcgagaagtgggcggcgctgcgggcgctcgtc
tcgttgacgaccgatcttctcgagcaggtgccggagttggacctcgacggcttgctcgcc
gagctgcgcacgcgggccgaggcgcggcacccaccgaccgtggagggcgtgaccctggcg
tcgctgcacgcggcgaaggggctcgagtgggacgccgtcttcctggtggggttggtcgac
gggaccttgccgatcagtcacgctcttggggacagctcgtcggcgccggacgaggccgcg
gtcgaggaggagcggcgtctgctctacgtcggggtgacccgggcccgtgtccatctggag
ctgtcgtgggctctcgcacgcaacgagggtgggcgcaagtcccgtcgccggtcgcgcttc
ctggtcgacctggtgcccgagtcgtcgccggcctcccgcatcgccgcgccggcgcccacc
cgtaagcggccggtctgtcgggtctgcggctcgccggtgatcgggaccgtggccaccatg
ctgggtcggtgcgagaagtgtccgtcggacgtggacgttcccctgctcgaagcgctacgg
gagtggcggtcggccacgtcgaagacgttgaaggtgcccgcgtacgtcgtgttcagtgac
aacaccctgacggccatcgccgagcagcgtccgcgcgacgaccgatccctcgtggccatc
ccgggcatcggcgcgaagaagttggagcggttcggggccgacgtcctcgcgatcgtcggg
gagcgggcgacccgctga
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