Rhodococcus sp. PBTS 1: A3Q40_02089
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Entry
A3Q40_02089 CDS
T05182
Symbol
pgdS
Name
(GenBank) Gamma-DL-glutamyl hydrolase
KO
K21471
peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
Organism
rhu
Rhodococcus sp. PBTS 1
Brite
KEGG Orthology (KO) [BR:
rhu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rhu01002
]
A3Q40_02089 (pgdS)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhu01011
]
A3Q40_02089 (pgdS)
Peptidases and inhibitors [BR:
rhu01002
]
Cysteine peptidases
Family C40
A3Q40_02089 (pgdS)
Peptidoglycan biosynthesis and degradation proteins [BR:
rhu01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
A3Q40_02089 (pgdS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLPC_P60
EAD8
EspA_EspE
Motif
Other DBs
NCBI-ProteinID:
AMY19465
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Position
2286682..2287800
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AA seq
372 aa
AA seq
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MRASTEPASPVRLSPTAAPDSITVTLTVPGLDSLLAPIDGVLAQLGRGVLPPGSVDTVLA
AGAQAADAVGSALRTAVDDVDWSGPAATAAGDLVARAAEAATALARESEALASLAARACE
VVARGTAEVGAIASSFVAAATPLLPTAVTPAGAAAVATLADTALAQAAAVATRVRAELDA
LGGEVAALVPPVVPSLPGPPSLVTDVERFLQRTLDPMPGTPDAGPAESAPGHRAYDPAAG
GTGREVVLPDGSTALAPNARAAEAVRFALAQQGTPYVWGGTTPGQGLDCSGLTQSAYGQA
GVDLPRLAAEQSVGSPVSVENLMPGDLAVWDGHVAMVVGNGQLVEAGDPVSVSPVRTTNA
GMAFHGFYRPTE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgagggcgtccaccgagccggcgtcccccgtccggctgtcacccaccgcggcgccggac
tcgatcaccgtcaccctgacggtgcccggcctcgattccctgctcgccccgatcgacggg
gtgctcgcccagctgggccgtggcgtcctgccgcccggctccgtggacaccgtcctcgcg
gccggcgcgcaggccgccgatgccgtcggctccgcgctgcggaccgcggtcgacgacgtc
gactggtccggtcccgccgccaccgccgccggtgacctggtggcccgcgccgccgaggcc
gcgacggcgttggcgcgcgaatccgaggcgctggcgtcgctcgccgctcgggcctgcgag
gtggtcgcgcgcggaaccgccgaggtcggggcaatcgcgtcctcgttcgtcgcggccgcg
acgccgttgctgccgaccgccgtgaccccggccggggccgcggccgtggcgacactcgcg
gacacggccctcgcgcaggcggccgccgtcgccactcgggtccgcgcggaactggatgcg
ctgggcggtgaggtggcggctctggttccgccggtcgtgccctccctgccgggcccaccg
tccctcgtcaccgacgtcgagcggttcctccagcgcacgctcgacccgatgcccggcacg
ccggacgccggacccgccgagtccgcacccggacaccgggcctacgaccccgccgccgga
ggtacgggccgcgaggtcgtgctgccggacggctccaccgcgctggcgccgaacgcccgc
gcggccgaggccgtccgattcgccctcgcacagcagggcaccccgtacgtctggggcggc
accactcccggccaagggctggactgcagcggcctgacgcagagcgcgtacggccaggcc
ggagtggatctcccccgcctcgcggccgaacagtcggtcgggagcccggtgtcggtggag
aacctcatgcccggagatctcgccgtctgggacggccacgtcgccatggtggtgggcaac
gggcaactcgtcgaggcgggcgacccggtgtccgtctcacccgtccgaaccaccaacgcg
ggcatggcctttcacgggttctatcggcccacggaatga
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