Rhodococcus sp. PBTS 1: A3Q40_02716
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Entry
A3Q40_02716 CDS
T05182
Symbol
phrA
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rhu
Rhodococcus sp. PBTS 1
Brite
KEGG Orthology (KO) [BR:
rhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhu03400
]
A3Q40_02716 (phrA)
Enzymes [BR:
rhu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
A3Q40_02716 (phrA)
DNA repair and recombination proteins [BR:
rhu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
A3Q40_02716 (phrA)
Prokaryotic type
A3Q40_02716 (phrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AMY20083
UniProt:
A0A143QA21
LinkDB
All DBs
Position
complement(2939645..2940988)
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AA seq
447 aa
AA seq
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MSTAPTVLWFRRDLRLGDHPALAHAAEAGGDVLALFVLDPALLDPAGAARRDVLYRALGS
LDEALDGRLLVVKGDPGTAVPKVAKAVGAEAVHASEDFGPYGRRRDEQVGEKVDLVFTGS
PYTVSPGRITKDDGDPFKVFTPFYKRWQEHGWRDPADTSASTASWIDPGDVSGGPRRVKV
PSEKHHVDAEIGEKEALSAWKDFVDDRASGYGDERNRPDLDSTSRMSVYLKYGMIHPRTL
LADLKGKAAEPYRRELCFRDFYADVLFQRPDSARENYDKRFDKIELDSGKHADELFDAWC
EGRTGFPIVDAGMRQLVSENWMHNRVRMIVASFLVKDLHLPWWRGARFFLQHLMDGDIAS
NQHGWQWTAGTGTDASPYFRVFNPTTQGEKFDPQGDYVRRWVPELRGVEGKAVHALKDGR
PEDYPEPIVDHKHEREEALRRFAAIKD
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgcgcccaccgtcctgtggtttcgtcgcgacctccggctgggcgaccacccc
gcgctcgcgcacgccgcggaggccgggggcgacgtgctggcgctgttcgtgctcgacccg
gcgctgctcgatcccgccggcgccgcgcgccgcgacgtgctctaccgcgccctggggtcc
ctcgacgaggcgctggacggccgattgctggtggtgaagggcgacccggggacggcggtg
ccgaaggtcgcgaaggccgtcggggccgaggccgtgcacgcgagcgaggacttcggaccg
tacggacgacgtcgggacgagcaggtgggggagaaggtggacctggtcttcaccggctcg
ccgtacacggtctccccggggcggatcaccaaggacgacggcgaccccttcaaggtgttc
acgccgttctacaagcggtggcaggaacacggctggcgggacccggcggacacgtcggcg
tccacggcgtcgtggatcgaccccggcgacgtctcgggagggcctcggcgcgtgaaggtt
ccgagcgagaagcatcacgtcgacgccgagatcggggagaaggaagcgctctcggcgtgg
aaggacttcgtcgacgatcgggcgagcggctacggcgacgagcgcaaccggcccgatctc
gacagcaccagccgcatgtcggtgtacctcaagtacgggatgatccacccgcggacgttg
ctcgcggacctgaaaggcaaagcggccgaaccgtatcggcgcgagctgtgcttccgcgac
ttctacgccgacgtgctgttccagcgtcccgacagcgcccgcgagaactacgacaagcgg
ttcgacaagatcgaactggactccggcaagcacgcggacgagttgttcgacgcgtggtgc
gagggccgcacgggcttcccgatcgtcgacgccgggatgcgccagttggtgtcggagaac
tggatgcacaaccgcgtgcgcatgatcgtcgcgtcgttcctggtcaaggatctgcacctg
ccgtggtggcgcggtgcgcgattcttcctgcagcacctgatggacggcgacatcgcgagc
aaccagcacgggtggcagtggacggcgggcacgggcaccgacgcctcgccgtacttccgc
gtgttcaaccccaccacgcagggggagaagttcgacccgcagggtgactacgtgcgccgg
tgggtgccggaactgcgcggcgtcgagggcaaagcggttcacgccctgaaggacgggcgg
ccggaggactacccggagccgatcgtcgaccacaagcacgagcgcgaggaggcgctgcgg
cggttcgcggccatcaaggactga
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