Rhodococcus sp. PBTS 1: A3Q40_03578
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Entry
A3Q40_03578 CDS
T05182
Symbol
vsr
Name
(GenBank) Very short patch repair protein
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
rhu
Rhodococcus sp. PBTS 1
Brite
KEGG Orthology (KO) [BR:
rhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhu03400
]
A3Q40_03578 (vsr)
DNA repair and recombination proteins [BR:
rhu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
A3Q40_03578 (vsr)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Yop-YscD_ppl_1st
STN
Motif
Other DBs
NCBI-ProteinID:
AMY20935
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All DBs
Position
3810646..3811089
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AA seq
147 aa
AA seq
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MAERPRTDAATSARLSKQRRRDTKPELALRRLLHAAGLRYRVDRAPLPGLRRRADVVFTR
ARVAVYVDGCFWHSCPVHATHPRNNAQWWADKLAGNVARDRDTDRRLEEAGWTVVRIWEH
EDPTAAAEKVVRAVRADEADEPDEPSD
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcgtccgcgcaccgacgccgccaccagcgcgcgcctgtccaagcaacgccgc
cgcgacacgaagccggagctcgccctgcggcgcctgttgcacgcggccggtctgcgctac
cgcgtcgaccgggctccgcttcccggactgcgtcgtcgtgccgatgtggtgttcacccgc
gcgcgggtggcggtctacgtggacgggtgcttctggcacagctgtcccgtgcacgccacc
cacccccgcaacaacgcgcagtggtgggcggacaagttggcgggcaacgtcgctcgcgac
cgcgacaccgaccggcgactcgaggaagccggctggacggtggtgcggatctgggaacac
gaagatccgacggccgcggccgagaaggtcgtccgcgccgtgcgggccgacgaggccgac
gagcccgacgagccgagcgactaa
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