Rhodococcus sp. PBTS 1: A3Q40_03638
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Entry
A3Q40_03638 CDS
T05182
Symbol
ppsA
Name
(GenBank) Phthiocerol synthesis polyketide synthase type I PpsA
KO
K12437
polyketide synthase 13
Organism
rhu
Rhodococcus sp. PBTS 1
Pathway
rhu00074
Mycolic acid biosynthesis
rhu01100
Metabolic pathways
rhu01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rhu00001
]
09100 Metabolism
09103 Lipid metabolism
00074 Mycolic acid biosynthesis
A3Q40_03638 (ppsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhu01004
]
A3Q40_03638 (ppsA)
Lipid biosynthesis proteins [BR:
rhu01004
]
Polyketide synthase
Modular PKS
A3Q40_03638 (ppsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
Ketoacyl-synt_C
PP-binding
Thioesterase
KAsynt_C_assoc
ACP_SdgA_C
Thiolase_N
RhiE-like_linker
CurL-like_PKS_C
Motif
Other DBs
NCBI-ProteinID:
AMY20992
LinkDB
All DBs
Position
complement(3872098..3877344)
Genome browser
AA seq
1748 aa
AA seq
DB search
MDTRTGDAEITGDSGGTDETASTTGADGSSDMTVAQLRDWLRNWVAEVTGQPVSQISDDR
PMEEFGLSSRDAVALSGEIEELVGVTLTATVAYQHPTIASLATRIIEGEPDVPEGAADDA
FYLGASAGTGHDVAVVGLSTRLPGAGHTPESTWELLIEGRDGIGDLPEGRWSEFLGDARI
AEAVRTTVTKGGYLDDVKGFDAEFFAMSPREAANVDPQQRLALELAWEALEHARIPASGL
KGAPVGVFVGTSTNDYQMIAISDTDPHPYALTGTSTSIVANRISYYFDFRGPSVALDTAC
SSSLVAVHQAVRSLRSGESTVALAGGVNMILAPAATLGFGQTGVLAPDGRIKAFSSDADG
MIRSEGGGLLVLKRLEDAERDGDDILAVIKGSAVNQDGRSNGLAAPNPDAQADVLRAAYR
DAGILPSTVDYIEAHGTGTILGDPIEADALGRVVGRGRSAEAPALLGSAKTNFGHLESAA
GAAGLIKVVLAMREDRLPASLNYAGPNPYIPFDAAHLQVIDTPTAWPRYSGSAVAGVSGF
GFGGTNAHVVVAEYVPGAAEAEPATDGAVAFDATAVDPEALVGEPVGAPEETDAEVRKVL
AEVTGGADPTGNAPSDAAAEPALPVLLAVSASMPSRRRRTAAELADWLETEAGSTTDLES
VARALAKRNHGRSRAVVLATTRAEAITGLRAVAAGKPGTGVLSSDSPAANGAVWVFSGFG
AQHRKMAKELYAAEPLFAAALDRVDELIEDESGYSIRAIVADDAQTYEFENSQVAIFAIQ
VALVETLRAYGATPAAVVGHSMGEVAAAYAAGGLGLEDAVRIIVARSRLLGEGQEGLGDA
EAGAMALVEFSAAEVAELAERFPGVEPSVYAAPTHTTVGGPAEPVQKLVEHAESLGKMGR
VLDVRGAGHTSAVDPLLGELAAELMGIEPHPLDTAVFSSVDKEAFYRAGHDPIHGVDYWT
KGMRHAVWFTQAVKTAVDSGYTTFVELAPNPVALMSVAATAWAAGVPDATLIATLKRKES
EPATFRAALAELYVHGHPVDLAAVIGPGEYAPIPRTAFLRKEHWLHADVSLGGSPARVAL
PDGRTVWETPVARVASADDLVRRLASEVLSDVAVGAVVGGVGGADVVDSVPTTGSITTVL
TPHPGGAALQLQWNDGGTFRPWAEAVVTSGAAAVSAGVPASAAAPSVADATVGDGVEYEP
EVVEDFGNRWDPEGTQTMEERLAIIVAESMGYAPEDLPAEIPLIELGLDSLMAVRIKNRV
EFEFDIPQVQLQAVRDASLREVEKYLRYALENREEVEALAEEQRREREAEEAREAAATAA
PDTTAAATAAPDTTESTPEPEATGPSVATAFEAPVTDTAPAVTEPAVAPSSDASDAKSFA
EATGTDVAPRDAAERLTFATWATVTGQSAKGIFNPLPVLDDPTAEKLAERLSERAKGEVT
FDDILDSETIEQLADVVRPFLEAGDVTGLVRTLRARPEGSTAVPVFVFHPAGSSCVVYEP
LLRRLPADTPMYGLERTEGPIEERAREYLPILREIQGDGPYVLMGWSLGGVLSYAVATLL
RAEGADVRYVGLIDTVMPYEPIPDTPEEIELRWKRYAQVGKKLYNVDYPLPYERLAKADD
DGQIAIIMDLLKMSSAKIPSGIIEHQRTSWLDNRAIQTAQPEHYDGDVTLYMADKYHDDA
IALEPRLGRREEHGGWGPYAPNLDIVHIGGDHLAVIDEPYISAIAADLTKKLQTISAAST
PKESESHT
NT seq
5247 nt
NT seq
+upstream
nt +downstream
nt
gtggacacccgcaccggggacgccgagatcaccggtgattccggggggaccgacgagacg
gcgagcacgacgggagccgacgggtcgtcggacatgaccgtcgcccagctgcgcgactgg
ctgcgcaactgggtcgccgaggtcaccgggcagccggtctcgcagatctccgacgatcgt
ccgatggaggagttcggtctctcgtcccgcgacgccgtcgcgctcagcggtgagatcgag
gagctggtcggtgtcacgctgaccgcgacggtcgcctaccagcaccccacgattgcgtcg
ctggccacgcgcatcatcgagggcgaacccgacgtcccggagggcgccgcggacgacgcc
ttctacctcggagcgtccgcgggcacgggtcacgacgtcgcggtcgtcggtctctcgacc
cgactgcccggtgccgggcacacccccgagtcgacgtgggagctgctcatcgagggccgc
gacggcatcggcgacctccccgagggtcgctggtcggagttcctcggcgacgcccgcatc
gccgaggccgtgcggaccaccgtcaccaagggtggctacctcgacgacgtcaagggtttc
gacgcggagttcttcgcgatgtcgccgcgcgaggccgcgaacgtcgatccgcagcagcgg
ctcgcgctggagctggcgtgggaagcgctcgagcacgcgcggatcccggccagcggtctg
aagggcgcgccggtgggcgtgttcgtcggcacgtcgaccaacgactaccagatgatcgcg
atcagcgacacggacccgcatccctatgccctgacggggacgtcgacgtcgatcgtcgcc
aaccgcatctcgtactacttcgacttccgcggtccctcggtcgcgctggacaccgcctgc
tcgtcctcgctcgtggccgtgcaccaggccgtgcggagcctgcgcagcggcgaatccacc
gtcgccctggccggcggcgtgaacatgatcctcgcgccggcggcgaccctcggcttcgga
cagacgggcgtgctggcgccggacggacgcatcaaggccttctcctcggacgccgacggc
atgatccgatccgagggcggcggcctgttggtgctgaagcgtctcgaggacgccgagcgc
gacggcgacgacatcctcgccgtcatcaagggcagcgcggtcaaccaggacggccggtcc
aacggtctcgccgccccgaaccccgacgcccaggccgacgtcctgcgggcggcctaccgg
gacgccggcatcctgccgtcgaccgtcgactacatcgaggcacacggcaccggcaccatc
ctcggcgatccgatcgaggccgacgcgctcggccgtgtcgtcggccgcggacggtccgcc
gaggccccggctctgctcggatcggccaagaccaacttcggccacctcgagagtgcggcg
ggcgcagcgggtctgatcaaggtggtcctcgcgatgcgcgaggaccggctgccggcgtcg
ctcaactacgccgggcccaacccgtacatcccgttcgacgccgcgcacctccaggtgatc
gacacccccacggcctggccccggtactccggatcggccgtcgccggcgtctccggattc
ggcttcggcggcaccaacgcccacgtcgttgtcgcggagtacgttcccggcgccgccgag
gccgagcccgccaccgacggtgccgtcgcgttcgatgcgaccgccgtcgaccctgaggca
ttggtcggcgagcccgtgggcgcgccggaggagaccgacgccgaggtgcgcaaggtgctc
gcagaggtgaccggcggtgccgaccccaccgggaacgcgccgtccgacgccgctgccgag
cccgcgctgccggtgctgctggcggtgtccgcgtcgatgccgtcgcggcgtcgtcgcacc
gctgcggagctcgccgactggctcgagaccgaagcgggcagcacgacggatctggagtcc
gtcgcgcgcgccctcgccaagcgcaatcacggtcggtcacgcgcggtggtcctggccacc
acgcgggccgaggcgatcaccggtctgcgcgcggtcgcggccggcaagccgggcacgggc
gtcctgtcgtccgacagccccgccgccaacggtgcggtgtgggtgttctccgggttcgga
gcccagcaccgcaagatggcgaaggagctctacgcggccgagccactgttcgccgccgcg
ctggaccgcgtcgacgagctgatcgaggacgagtccggctactcgattcgcgcgatcgtc
gccgacgacgcgcagacgtacgagttcgagaactcccaggtcgccatcttcgccatccag
gtggcactggtggagaccctgcgtgcctacggcgcgactcccgctgcggtcgtgggccat
tcgatgggcgaggtcgccgcggcgtacgcggcgggtggtctcggtctcgaggacgccgtc
cgcatcatcgtcgcccgctcccgcctgttgggcgaggggcaggaaggtctcggcgacgcc
gaggccggcgccatggccctggtggagttctccgccgccgaggtggcggagctggcggag
cgcttccccggcgtcgagcccagcgtctacgccgcccccacgcacaccaccgtcggcggt
ccggccgagccggtgcagaagctggtggagcacgcggagtcgctcggcaagatgggtcgt
gtgctcgacgtgcgcggagccggccacacgtcggccgtcgatccgctcctcggtgagttg
gccgccgaactgatgggtatcgagccgcacccgctggacaccgccgtgttctcgtcggtc
gacaaggaggcgttctaccgcgccggccacgacccgatccacggggtggactactggacc
aagggcatgcgccacgcggtctggttcacccaggcggtgaagacggccgtcgactccggc
tacaccacgttcgtcgagctggcaccgaacccggtggcgctcatgtccgtcgcggccacc
gcatgggccgcgggcgttcccgacgccacgctgatcgccacgctcaagcgcaaggagagc
gagccggcgacgttccgggccgcgctggccgagctgtacgtgcacggacacccggtcgac
ctggccgcggtgatcggccccggcgagtacgcgcccatcccgcgcaccgcgttcctgcgc
aaggagcactggctgcatgccgacgtctccctcggcgggtcgcccgcccgcgtcgctctt
ccggacgggcgcaccgtgtgggagacccccgtcgcgcgcgtcgcctccgcggacgacctg
gtccgacggctggcgtccgaggtgctgtccgacgtcgccgtcggtgcggtcgtcggcggt
gtcggcggtgccgacgtcgtcgacagtgtgccgaccacggggtcgatcaccacggtgctg
accccgcatccgggcggtgctgccctgcagctgcagtggaacgacggcgggaccttccgc
ccctgggccgaggccgtcgtgacgtccggtgccgcagcggtgtccgccggcgttccggcg
tccgcagccgccccgagtgtcgccgacgccaccgtcggggacggcgtcgagtacgagccc
gaggtggtcgaggacttcggcaaccgctgggatcccgagggcacccagaccatggaggag
cggctcgcgatcatcgtcgccgagtccatgggctacgcacccgaggacctgccggccgaa
attccgctgatcgaactgggcctcgactcgctcatggccgtgcgcatcaagaaccgggtg
gagttcgagttcgacattccccaggtgcagttgcaggccgtgcgcgacgccagcctgcgc
gaggtggagaagtacctccgctacgccctggagaaccgcgaggaggtcgaggcgctcgcc
gaggagcagcgccgcgagcgcgaggcggaggaggcccgggaagcggcggcgacggcggct
ccggacaccacggcggcggccaccgcggcgccggacaccaccgagtccactccggaaccg
gaggccaccggaccgtccgtcgcgacggcgttcgaggcaccggtcaccgacacggccccg
gccgtgacggaaccggcggtcgccccgagcagcgacgcgtcggacgcgaagagtttcgcc
gaggccaccggtaccgacgtcgccccgcgcgacgcggccgagcggctgacgttcgccacc
tgggcgaccgtcaccgggcagtccgccaagggcatcttcaatccgctgccggtcctggac
gaccctaccgcggagaagctggccgagcgcctgagcgagcgcgcgaagggcgaggtgacg
ttcgacgacatcctcgactccgagaccatcgagcagctcgccgacgtcgtgcgcccgttc
ctcgaagccggcgacgtcaccggtctggtgcggaccctgcgggcgcgccccgaggggtcg
accgccgtgccggtgttcgtcttccacccggcgggcagctcgtgcgtggtgtacgagccg
ctgttgcgccgcctgccggccgacaccccgatgtacgggctcgagcgcaccgagggcccc
atcgaggagcgggctcgcgagtacctgccgatcctgcgggagatccagggcgacggcccg
tacgtcctcatgggctggtccctgggaggcgtgctgtcctacgccgtggcgacgctgttg
cgggcggagggagcggacgtgcgttacgtgggtctcatcgacacggtgatgccgtacgag
ccgattccggacaccccggaggagatcgagctgcgctggaagcggtacgcgcaggtgggc
aagaagctctacaacgtggactacccgctgccgtacgagcggttggcgaaggccgacgac
gacggtcagatcgccatcatcatggatctgctgaagatgtccagcgccaagattccgagt
ggcatcatcgagcaccagcggacgtcgtggctcgacaaccgcgccatccagacggcgcag
ccggagcactacgacggcgacgtcacgctgtacatggcggacaagtaccacgacgacgcc
attgccctcgagccgcgactgggtaggcgcgaggagcacggcgggtggggcccgtacgca
ccgaacctggacatcgtgcacatcggcggtgaccacctggccgtgatcgacgagccgtac
atctcggcgatcgcggcggacctgacgaagaagttgcagacgatctcggcagcatccacg
ccgaaggaaagcgagtcgcacacgtga
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