Rhodococcus sp. PBTS 1: A3Q40_03833
Help
Entry
A3Q40_03833 CDS
T05182
Name
(GenBank) hypothetical protein
Organism
rhu
Rhodococcus sp. PBTS 1
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
nSTAND1
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_NOL10_N
Beta-prop_VPS8
WDR55
Beta-prop_WDR36-Utp21_1st
HTH_31
DUF7165
EIF3I
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
AAA_16
Beta-prop_RIG_2nd
ABC_tran
HTH_3
AAA_21
AAA_29
AAA_22
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AMY21181
LinkDB
All DBs
Position
4089541..4093299
Genome browser
AA seq
1252 aa
AA seq
DB search
MSWGAGRGLASVETREDFADALRGLRQASGFTVRAIADSADVRLATVGGWFSGKHVPTPA
NQDAFRRVLGACGVTADDADAWWAAVMRVRRATQRRAAATPYRGLEAFSVGDSRWFHGRE
EETDALLDRVRLLTGGGILAVVGASGAGKSSLLSAGLLARIERGDLGARTAVRITPSRLR
NPTDLDPRPDIVVVDQAEELWGEAFDAGERRRYLDRLEGLTTDGRHPVVAVVALRADFYA
VALTEPIAAAALASDPLVVGPLDEQRVRRVITAPAETAGARVDPALVEVLLAELGVRSQH
GLSPSTLPLLSHVLLATWERARTSTLSIADYRQTGGIAGAVEHTAEAVLGTYDVDDRAVA
ERLLLRLVDLDGPTVTRRLVPLSEVGAVASEVVDDLTDARLVTVDEQFVTITHESLVTTW
PRFAELIDAHRDWVVHHRTLTQYAHGWNETGRDRGELLSETRSALYESLLSTGGRREHLN
ALETEYLTESAAEHHRAADARRRRARVRAALTSALAVMTVLAVAAATFAVSARSRAVSER
NDAVEARAIADARVVLAQSRRLRDQDPALSAQLAVAAYETDPSFDARSAVLDTTASAFPT
RVVGSAGPTQSVLDEAGRVLAVGYSSGSVDLYSDDSDDASAFAQAPPARLSTDAGPVQSL
AVDAAGTRLAIGSATGVAVYDLAALDRPRRVATLPLDTTAQSIAFRPGGAELAVGTAAST
VLRWAYETPASPTRLDLPGAGNTVVAYTPDGGRVLGAGNGRTLAVWDAVSGAPLFAVPFD
GSTYRYLDLDVSPDGTTLAAGTTGREVARWTLGGDGALTALAPLGRFDSYVSSVAFDRTG
QFLAAGSADASTVVWNARTDDEVTEFPGPAIVGSVAFGRTGSLITSDGSGTTRRWRVPGP
ELPGPTSSVYTLAHRQGGPSVLAGVGVRGDGAVVWRAGTGGVEPTPTTLRPGPGVTYTGA
SALSGDSSTAALGTTTGGVELWDVSDPARPARLGALDGVVPLLVGGLAFTADGRHLLLSQ
QDAPDIAVLDLADLTAPRAVSTFTVTGLPSLTVFRTDRAIAHVATSAAAVETWDLTDPGR
PERIGTLTGLPAGANAVALSADDAVLAVGTADGTVTLVDATDPAETRVLGRTGADTEVYS
LAFDADGERLVGGTSIDSAWIWDVRDPTTPRPYAALSAIGERVNDAVFVGATSLLAGGAG
GTVRQWTVDPEFAVENLCSRAGALVTEREWADLLPGVNYDPPCDEAAPRAPR
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgagctggggggccgggcggggtttggcgtcggtggagacgagggaggacttcgcggac
gcgctgcgaggcctccggcaggcgagcggattcaccgtccgcgccatcgccgacagtgcg
gacgtccgcctggcgacggtgggtggctggttcagcggcaagcacgttccgacgccggcc
aaccaggacgccttccgtcgtgtgctcggtgcctgcggggtcaccgccgacgacgccgac
gcgtggtgggccgcggtgatgcgagtgcggcgcgcgacccagcgccgggcggcggcgacg
ccctaccgaggtctggaagccttctccgtcggtgactcccggtggttccacggccgggag
gaggagaccgatgcgctgctcgaccgagttcggctgctgaccggaggcggaattctggcc
gtggtcggagcgtccggcgccggaaagtcctcgctcctgtcggcgggcctgctggctcgg
atcgagcgcggcgacctcggtgcgcggacggccgtgcgcatcacgccgtcgaggctgcgg
aatccgacggacctcgacccgcgaccggacatcgtcgtggtcgatcaggccgaggaactg
tggggagaggcgttcgacgccggcgagcgtcgacggtatctggaccgcctcgagggcctg
accaccgatgggcgccaccccgtggtggcggtggtcgcgctgcgcgcggatttctacgca
gtcgccctcacggagcctattgcggcggccgcgctcgcgtcggatccgctggtcgtcggc
ccgttggacgagcagcgggtgcgtcgggtgatcaccgcccccgccgagaccgccggtgcg
cgggtcgaccccgcactcgtcgaggtgttgctcgcggagctgggtgtgcgatcgcagcac
gggttgtcgccgtcgacactccctctgctctcgcatgttcttctcgcgacctgggagcgc
gcgcgcacgtccacgttgtccatcgcggactatcgacagaccggggggatcgccggcgcg
gtggagcacacggcggaagcggtgctcggcacgtacgacgtggacgaccgggccgtggcc
gagcgtctgctcctgcggctggtggacctcgacggcccgaccgtgacgcgtcgcctcgtg
cccctctccgaagtgggggccgtcgcgtccgaggtggtcgacgatctcaccgacgccaga
ttggtgaccgtcgacgagcagttcgtgacgatcactcacgagtcgttggtgaccacgtgg
cctcgattcgcggagctgatcgacgcccaccgggactgggtggtgcaccaccgcacgctg
acgcagtacgcgcacgggtggaacgagacgggccgcgaccgtggcgaactgttgagcgag
acgcgatcggccctgtacgaatccctgctctccaccggcggccgacgcgaacacctcaac
gcgctcgagacggagtacctcaccgaatcggcagccgagcatcaccgggcggccgacgcg
cgtcgccgacgggcccgtgtgcgggcggcgttgacgtcggctctggccgtgatgacggtg
ctcgcggtggccgcggcgacattcgcggtgtcggcgcgatcacgcgcggtgtccgaacgt
aacgacgcggtcgaggctcgggcgatcgcggacgcacgcgtcgtcctcgcgcagtcgcgg
cgactccgcgaccaagacccggcactgtcggcgcagctggcggtggcggcctacgagacg
gacccgtcgttcgatgcccgatcggcggtcctggacaccacggcgtcggcgttcccgact
cgcgtcgtcggctcggcagggcccacccagtccgttctcgacgaggcgggacgtgttctg
gccgtggggtattcctcgggatcggtggatctgtattccgacgattcggacgatgcgagc
gcgttcgcgcaggccccgccggcgcggttgagcacggatgcgggccccgtgcagtcgctc
gcggtagacgcagcgggaacgcgactggcgatcggcagcgccacgggcgtcgccgtgtac
gacctcgctgcactcgaccggccgcgcagggtcgcgactctgcccctcgacacgacggcg
caatcgatcgcgttccgtccgggaggtgccgagctggcggtggggaccgcggcgtcgacg
gtgctgcggtgggcgtacgagacgcccgcgtcgccgacgcgactcgatctacccggagcc
ggaaacaccgtcgtggcctacacgcccgatggcggccgagtcctgggtgccgggaacggg
cgcacgctcgccgtgtgggacgccgtctcgggcgcacccctgttcgcggtcccgttcgac
ggctcgacctaccgctacctcgatctcgacgtgtcgccggacggaacgacgctggcggcg
ggaaccaccgggcgggaggtcgcacggtggactctcggcggagacggcgcgctcacggcc
ctcgcgccgctggggcggttcgacagctacgtctcctcggtcgccttcgatcggaccggg
cagttcctcgccgcgggcagtgcggacgcgtcgacggtcgtgtggaacgcgcgcaccgac
gacgaggtgacggagtttcccggacccgcgatcgtcggcagcgtcgcgttcggccgcacc
ggatcgctgatcacgtccgatgggagtgggaccacccggcgatggcgtgtacccggcccc
gaactccccggaccgacatcgagcgtctacacactggctcaccggcagggtggaccgtcg
gtactagcgggtgtcggagtgcgtggcgacggcgccgtggtgtggcgggccgggaccggt
ggcgtcgagccgacgccgacgacgcttcgtcccggcccgggggtgacgtacaccggggcg
tcggcgctgagcggggacagctcgacggcggcgctcggcacgaccaccggtggcgtcgag
ctgtgggatgtctccgaccccgcacggccggcgcggctcggagcactcgacggtgtggtc
cccctgctggtcggcggtctcgcgttcaccgccgacggccggcacctgctgctgtcccag
caggacgcacccgacatcgccgtcctcgatctggccgatctcaccgcccctcgcgctgtg
tcgacgttcacggtgaccggtctgccgtcgttgacggtcttccgcacggaccgcgcgatc
gcgcacgtcgccacgtcggccgccgccgtcgagacgtgggacctgacggatccgggccgc
ccggagcggatcggaacgctgacgggactgcctgccggcgccaacgcggtcgcgctgtcg
gcggacgatgcggtgctggccgtcgggaccgcggacgggacggtcaccctcgtcgacgcg
accgatcccgcggagacgagggtgctgggcaggaccggcgcggacacggaggtgtactcg
ttggcgttcgacgccgacggcgaacggctggtggggggaacgtcgatcgactcggcgtgg
atctgggacgtgcgcgatccgacgacgcctcggccctacgcagccttgagcgcgatcggg
gaacgggtgaacgacgcggtcttcgtcggagcgacatccctgctggcaggcggtgcgggt
ggcacggtgcggcagtggacggtcgatcccgagttcgctgtcgagaacctgtgttcgcga
gcgggggcgctggtcaccgagcgggaatgggcggatctgctgccgggcgtgaactacgac
ccgccgtgcgacgaagcagcgcctcgggcccctcgctga
DBGET
integrated database retrieval system