Rhizobium sp. S41: BA939_00875
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Entry
BA939_00875 CDS
T05451
Symbol
cpdB
Name
(GenBank) 2',3'-cyclic-nucleotide 2'-phosphodiesterase
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
rhv
Rhizobium sp. S41
Pathway
rhv00230
Purine metabolism
rhv00240
Pyrimidine metabolism
rhv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhv00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
BA939_00875 (cpdB)
00240 Pyrimidine metabolism
BA939_00875 (cpdB)
Enzymes [BR:
rhv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
BA939_00875 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
BA939_00875 (cpdB)
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GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
PGA_cap
GH101_N
Motif
Other DBs
NCBI-ProteinID:
ANV22635
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All DBs
Position
1:complement(178647..180635)
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AA seq
662 aa
AA seq
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MSSLLALHPITRRSLLGGIAATSALVMLHPFAARAAANQAHLRIMETTDIHVHVFPYDYY
ADKPNDTMGLARTASIIDTIRAEAGNSMLVDNGDFLQGNPLGDYIAYERGMKAGDKHPVI
NAMNVLGYDCGTLGNHEFNYGLDYMSNTLAGAGFPYVCANLTKGQLASDPKNDELFFKPY
VILEKQIRDGGGVTSPVKVGIIGFVPPQIMMWDSKNLEGKAQTRDIVEAAKAWVPVMKEE
GADIIIALSHSGIDGKGQTERMENASLYLAAVEGIDAIFTGHQHLVFPGPKTWDGIEGAD
AVKGTLMGKPAVMAGFWGSHMGLIDLLLEKDGKSWKIVDFTSEARPIYHRDENRKVVADY
TDKPEVLAAAKVDHEAALAYVRRPVGKTSAPLYSYFALVADDPSVQIVSNAQTWYIKDML
KEGQYKDLPVLSAAAPFKSGGRGGADYYTDVPAGDIAIKNVADLYLYPNTVQAVLINGAQ
VKNWLEMSAGMFNTVEAGAKDAPLLNPDFPSYNFDVIDGVTYQIDISKPAKFDKDGKAVN
PDSNRIVNLQFNGKPIDPEQKFVVATNNYRASGGGKFPDIAGDKVIFVAPDTNRDVIVRY
IIDQGTINPSADANWSFAPVENTTAVFETGPKGRHYAADIKGARIEDAGDGAEGFAKFRL
IL
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgcttctcgccctccaccccattacccggcgctcgcttctgggtggcattgca
gccacttcggcgctcgtgatgttgcacccttttgctgcgcgtgcggcggccaaccaggcg
catctgcgcatcatggaaacgaccgacatccatgttcatgtctttccctatgattattac
gccgacaagccgaacgacacgatgggtctggcgcgcaccgcctcgatcatagacaccatc
cgcgccgaagccgggaactcgatgctggtggataacggcgacttcctgcagggcaacccg
ctcggcgactatatcgcctatgagcgcggcatgaaggccggcgacaagcaccctgtcatc
aatgccatgaacgtgttgggttacgattgcggcacgctcggcaaccatgaattcaactat
ggcctcgactatatgtcgaacacgcttgcgggcgccggtttcccctatgtgtgcgccaac
ctcaccaaggggcagctggcttccgatccgaagaacgacgagctgttcttcaagccctat
gtcattctggaaaaacagatccgcgatggcggcggcgtcaccagcccggtcaaggtcggc
atcatcggtttcgtgccgcctcagatcatgatgtgggactccaagaatctcgagggcaag
gcgcagacgcgtgacatcgtcgaggcggcgaaagcctgggtgcctgtcatgaaggaggaa
ggcgcggatatcatcatcgccctttcccattccggcattgacggcaagggccagaccgag
cgcatggaaaacgcatcgctatatctcgcagccgttgaaggcattgatgcgatcttcacc
ggccaccagcacctcgttttccccggtccgaagacttgggacggcatcgagggtgcggat
gcggtcaagggtacgctgatgggcaagccggcggtcatggccggcttctggggctcacat
atgggccttatcgacctgctgcttgaaaaggatggcaagagctggaagatcgtcgacttc
acctcagaagcccgcccgatctaccatcgcgatgaaaatcgcaaggtcgttgctgactat
accgacaagccggaggttctcgccgcagccaaggtggatcatgaagcggcccttgcctat
gtgcgccgcccggtcggcaagacatccgcgccgctctattcctatttcgcgctggtggca
gacgatccgtccgtgcagatcgtctccaacgcccagacctggtacatcaaggacatgctg
aaggaagggcagtataaggatctgcccgtgctttcggcagcagcaccgttcaaatcgggc
ggtcgtggcggcgcggattattacaccgatgtccccgccggtgacatcgccatcaagaac
gtcgccgatctctatctttatcccaacacggtgcaggcagtgctgatcaacggggcgcag
gtgaagaactggctggaaatgtccgccggcatgttcaatacggttgaggccggtgccaag
gatgcgccactgctcaacccagacttcccgtcctataatttcgacgtgatcgatggcgtg
acttatcagatcgacatttccaaaccggcgaaatttgacaaggacggcaaggcggtcaac
ccggacagcaaccgcatcgtcaatctgcagttcaatggcaagccgatcgatcccgaacag
aaattcgtggttgcgaccaataattaccgtgcaagcggcggcggcaaattccccgatatc
gccggcgacaaggtgatcttcgtcgcgcccgatacaaaccgcgacgtgatcgtgcgctat
atcatcgatcagggcaccatcaacccgtccgcggatgccaactggtcctttgcaccggtg
gaaaacaccaccgccgtcttcgagaccgggcccaagggacgccattacgcagccgacatc
aagggcgccaggatcgaggatgccggcgacggcgcggaaggtttcgcgaagttccgcctg
attctttaa
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