Rhizobium sp. S41: BA939_00915
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Entry
BA939_00915 CDS
T05451
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rhv
Rhizobium sp. S41
Brite
KEGG Orthology (KO) [BR:
rhv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhv03400
]
BA939_00915
Enzymes [BR:
rhv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BA939_00915
DNA repair and recombination proteins [BR:
rhv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BA939_00915
Prokaryotic type
BA939_00915
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
HAD
DUF5848
Motif
Other DBs
NCBI-ProteinID:
ANV22642
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Position
1:complement(186913..188352)
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AA seq
479 aa
AA seq
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MQTKASPVIVWFRKDLRLSDNLALLAAADHKGPVIPVYIREKCCGALGRAQEWWLHHSLT
ALHAALKKTGSRLVLASGDAGEVLRRLIAETGADTVFWNRRYDPEGISTDKTLKRALRDE
GLTVRSFSGHLLHEPSKLQTKSGGPYRVYTPFWRALEGGEEPHAPADAPDRLNAPRNWPR
SETLDEWQLLPKRPDWAREFSDIWTPGEDGAREKLSDFIDGALKGYEEGRDLPAKDATSR
LSPHLALGEISPATVWHATKGLSRHIASNDISRFRKEIVWREFCYHLLFHFPELDEKNWN
DSFDAFSWRDDDKSFTAWTRGMTGYPIVDAGMRQLWRHGTMHNRVRMIVASFLIKHLLID
WRKGEKWFRDTLVDADPASNAANWQWVAGSGADASPFFRIFNPILQGEKFDGDGDYVRRF
VPELARLERKYIHKPFEAPKEVLTKAGITLGETYPNPIVDHGRARERALAAYARVKKKT
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcagacaaaagcctctcccgtcatcgtgtggttccgcaaggacctgcgcctttcggac
aacctcgctttgcttgcggcggccgaccataaaggtcccgtcatccccgtctatatcagg
gaaaaatgttgcggcgcgctggggcgtgcgcaggaatggtggcttcaccactcgctcact
gcgcttcatgccgcgctcaagaaaacaggcagccgcctcgtgctcgccagcggcgacgcc
ggggaggttttgcgcaggctgatcgcggaaaccggcgcagacaccgtattctggaaccgc
cgctatgatcctgaaggtatttcgaccgacaagaccttaaaacgcgcgctccgggatgaa
ggcctgacggtacggagcttttccggacatctgctgcatgagccatcgaagctgcagacc
aaatccggtggtccctaccgggtctatacaccgttctggcgcgccctggagggcggcgaa
gagccccacgcgcctgcggatgcgccagacagactcaacgcgcccaggaactggccaaga
tcggaaacgctcgacgaatggcagctgctgcccaaaaggcctgactgggcaagggagttt
agcgatatctggacgcctggcgaagacggggcgcgagagaagctctccgatttcattgac
ggcgcactgaaaggttatgaagagggccgcgacctgccggcgaaggacgcgacttcccgg
ctttcaccgcacctcgcattaggagaaatctcacccgccaccgtctggcatgcgacgaag
ggactttcccgccacatcgcctcaaacgatatcagccgttttcgcaaggaaatcgtctgg
cgggaattctgctatcacctcctgtttcattttcccgagctggacgaaaagaactggaac
gacagtttcgacgccttcagctggcgggacgatgacaagtccttcacggcctggacgcgc
ggcatgaccggctatccgatcgtggatgccgggatgcggcaactatggcgccacggcacg
atgcataaccgcgtccgcatgatcgtggcgtccttcctcatcaagcatctgctgatcgat
tggcgcaagggtgagaaatggttccgcgatacgctcgtggacgccgatccggcctccaat
gccgccaactggcagtgggtggcgggttcgggagcagatgcctcgccatttttccgcatc
ttcaaccctatcctgcaaggcgaaaaattcgatggggacggcgattatgtccgccgtttc
gtaccggagcttgcaaggctggagcgcaaatatattcacaaaccattcgaggccccgaaa
gaggtgctgaccaaagcgggcatcacgctcggggaaacctacccgaaccccattgttgac
catggcagggcgcgggagagagcacttgctgcctatgccagagtgaagaagaagacataa
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