Rhizobium sp. S41: BA939_01305
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Entry
BA939_01305 CDS
T05451
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rhv
Rhizobium sp. S41
Brite
KEGG Orthology (KO) [BR:
rhv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhv03032
]
BA939_01305
03400 DNA repair and recombination proteins [BR:
rhv03400
]
BA939_01305
Enzymes [BR:
rhv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BA939_01305
DNA replication proteins [BR:
rhv03032
]
Prokaryotic type
DNA Topoisomerases
BA939_01305
DNA repair and recombination proteins [BR:
rhv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BA939_01305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
ANV22705
LinkDB
All DBs
Position
1:complement(266947..269631)
Genome browser
AA seq
894 aa
AA seq
DB search
MNVVVVESPAKAKTINKYLGSGYKVLASFGHVRDLPAKDGSVLPDQDFEMSWEVDSASAK
RMKDIADAVKSSDGLFLATDPDREGEAISWHVLDLLKKKRVLGDKPVKRVVFNAITKKAV
LDAMANPRDIDVPLVDAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVALRLVCDR
ESEIERFVSEEYWNISALLKTPRGDEFEARLVSADGKRLQNRAIKTGDDANRLKALLEGA
TYVVDSVEAKPVKRNPSPPFTTSTLQQAASSRMGFGASRTMQVAQKLYEGIDIGGETVGL
ITYMRTDGVQMAPEAIDAARKAIGEQFGDRYVPEKARFYSTKAKNAQEAHEAIRPTDFNR
TPDQVKRYLDADQLRLYELIWKRGIASQMASAEIERTTVEILASNGGEKAGLRAVGSVIR
FDGFIAAYTDQKEDGEQSDDGDDEGRLPPINERDNLAKQKINASQHFTEPPPRYSEASLI
KKMEELGIGRPSTYAATLKTLSDREYIVIDKRKLVPHSRGRLVTAFLESFFTKYVEYDFT
AALEEKLDRISAGELDWKQVLRDFWKDFFAQIEDTKELRVTNVLDALNEVLAPLVFPKRE
DGSDPRICQVCGTGNLSLKLGKYGAFVGCSNYPECSYTRQLTSDGAEAEAAALNEPKALG
ADPMTGEELTLRSGRFGPYIQRGDGKEAKRSSLPKGWKPEDIDHEKALALINLPRDIGKH
PETGKMISAGLGRYGPFLLHDGSYANLESIEDVFSIGLNRAVTVIAEKQSKGPGRGRSGT
PAALKELGDHPDGGPITVRDGRYGAYVNWGKVNATIPKGQDPASVTLDEALVLIAERIAK
TGTGGKPAKAKKTTAKKADGDAAAKPKATKAKAATKSKTAAKPKAAAKPKKAAE
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcgtcgtcgtagaatctcctgccaaagccaagacgatcaataagtatcttggc
tcgggctataaggttcttgcatcctttggccacgtcagagaccttcctgccaaggacgga
tcggtgctgcccgaccaggatttcgaaatgtcctgggaggtcgatagcgcgtccgccaag
cgcatgaaggatattgccgatgcggtaaaatcctccgacggcctctttctggcaaccgac
ccggatcgcgaaggggaagccatttcctggcatgttctcgatcttttgaagaagaagcgg
gttctcggcgacaagccggtgaagcgcgtcgtcttcaacgccatcaccaagaaagcggtg
ctggacgcgatggcgaacccgcgcgacatcgatgtgccgctggtggacgcctatctcgcc
cgccgagcgctcgactatctcgtcggcttcaacctctctccggttctgtggcgcaagctg
ccgggtgcacgttcggccggccgggtgcagtccgtggcgctgcgtctcgtctgcgatcgc
gaatccgaaatcgagcgtttcgtttccgaagaatactggaacatcagcgcacttttgaag
acaccgcgcggtgacgagttcgaggccaggctggtttcggccgatggcaagcgattgcag
aaccgcgccatcaagaccggcgatgatgcgaaccggctgaaagcgctgctcgaaggcgcg
acctatgtggtggatagcgttgaggcgaaacccgtcaaacgcaatcccagccctcccttt
acgacctcgacgctgcagcaggcggcctcttcgcggatgggcttcggcgcctcgcggacc
atgcaggtggcgcagaagctttatgaaggcatcgatatcggcggcgagaccgtcggtctg
atcacctatatgcgtaccgacggcgtgcagatggcccctgaagccatagatgccgcccgc
aaggccattggcgagcagttcggtgaccgttacgtgccggaaaaagcgcgtttctactct
accaaggccaaaaatgcgcaggaagcgcacgaggcgatccggccgaccgatttcaaccgc
acaccggatcaggtgaagcgttacctcgatgccgaccagctgcgcctttacgagctgatc
tggaaacgcggtattgcgagccagatggcgtcagccgaaatcgagcgcacgacggttgaa
attctcgccagcaacggcggcgagaaggctggcctgcgcgccgttggctccgtcatccgc
ttcgacggctttatcgccgcttataccgaccagaaggaagatggcgagcagagcgacgat
ggtgacgacgaaggccgtctgccgccgatcaatgagcgcgacaacctcgccaagcagaag
atcaatgccagccagcacttcaccgagccgccgccgcgttactcggaagcgtctctgatc
aagaagatggaagaactcggcatcggccgtccttccacctatgcggcaacgctgaagacg
ctgagcgaccgcgaatatatcgtcatcgacaagcgcaagctggtaccgcattcgcgtggc
cggctggtgacggctttcctcgaaagcttcttcaccaaatacgtcgagtatgatttcacc
gccgcccttgaagaaaagctcgaccgcatttccgccggcgaactggactggaagcaggtt
cttcgcgatttctggaaggatttctttgcgcagatcgaagataccaaggaactgcgcgtc
accaacgtgctggatgcgctgaacgaggttctggcgccgctggtgttcccgaagcgcgag
gatggttccgatccgcgcatctgtcaggtttgcggcaccggcaatctgtcgctgaagctc
ggcaaatacggtgcctttgtgggttgctcgaactatcctgagtgcagctatacccgccag
ctgacctccgatggcgcggaagctgaagccgctgctctcaacgagccgaaggcgctgggc
gctgatcccatgaccggcgaggagctgacgcttcgctccggccgtttcgggccctatatc
cagcgcggtgacggcaaggaagccaagcgctcctcgctgccgaagggctggaagcctgag
gatatcgatcacgaaaaggcgttggcgctcatcaacctgccgcgcgatataggcaagcac
ccggaaaccggcaagatgatctcggctggtctcggccgttacggacctttcctgctgcat
gatggttcctatgcgaacctggagagtattgaggacgtgttctcgatcggcctcaaccgc
gccgtgaccgtgattgctgaaaagcagagcaagggtccgggacgcggccgtagcggcacg
cccgctgctctcaaggagttgggcgaccaccctgatggcggcccgatcaccgttcgtgac
gggcgctacggcgcctatgtaaactggggcaaggtcaacgccaccattcccaaggggcag
gatccggcatccgtgacgctggacgaggcgctcgtgttgatcgccgagcgcattgccaag
accggcaccggcggcaagcccgccaaggccaagaaaacaaccgccaagaaggccgatggt
gacgccgctgcaaagccgaaggcgaccaaggccaaggcggcgacaaagagcaagacggcc
gccaagccgaaggcagcggccaaacccaagaaggcagcagagtga
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