Rhizobium sp. S41: BA939_02735
Help
Entry
BA939_02735 CDS
T05451
Name
(GenBank) peptidoglycan-binding protein
KO
K21470
L,D-transpeptidase YcbB
Organism
rhv
Rhizobium sp. S41
Brite
KEGG Orthology (KO) [BR:
rhv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rhv01002
]
BA939_02735
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhv01011
]
BA939_02735
Peptidases and inhibitors [BR:
rhv01002
]
Cysteine peptidases
Family C82
BA939_02735
Peptidoglycan biosynthesis and degradation proteins [BR:
rhv01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
BA939_02735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ANV22957
LinkDB
All DBs
Position
1:complement(548475..550343)
Genome browser
AA seq
622 aa
AA seq
DB search
MLALGLSVSTALPGTAGAVTLMDLLRGGPGKIARDRGELPPAGIVTSPSGSGSGAGQSAD
ASDPEPLPRVSGPRYYDYKADVARAVNTANFGEGLANLKFSATPEIAKALEAYYGAGGKT
LWVSGGELTERANAAIAFLETVGESGLDPADYSISAPAKDVTASISSNVAGTTSNGTPVE
TASAPVSDAYQRAQMQFELALSAKVLAYVQDTTRGRVDPNRLSGYHDFKRKTVNLAPVLK
LAGLSPDVAAYLRSREPSSAEYQALKAELARLRGEGDAAHVVRVPADLVLKPGNSSADMA
SVVKAIEHRASPAFKAEHAATISAYQQTPDYTPDLVELVKAFQSENGLKADGVIGRATVR
AMVGESNDAKIAKVQVAMEQIRWLPADLGQRYVFINQPAFMAYYHNEGVEQFGMKVVVGS
KANQTYFFQDEIQTVEFNPYWGVPQSIIINEMLPKLRRDPSYLDRLGYEVQVNGRAVSSS
SVNWYGSTNAVSVRQPPSSDNALGDLKILFPNAHAIYMHDTPAKSFFNRDMRALSHGCIR
LVDPRRMAAAVLGTSVDKVGEQIASGKNRAVQVPEKIPVYVAYFTAWPDRDGKVQFFDDV
YDRDSYVQKAFAVTTKARASSI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
gtgctggctctcggtctttccgtttccaccgctcttcccggcaccgccggtgcggtgacc
ctgatggacctcctgcgcggcgggcccggcaagatcgcgcgggatcgcggcgagttgccg
ccggccggcatcgtcacctcgccatccggctccggatcgggcgccggtcagagtgctgat
gcttccgatcccgagcctttgccccgcgtttccggcccacgctattatgattacaaggcg
gatgtagcccgggcggtgaacaccgcgaatttcggcgaaggccttgccaatctcaagttc
agcgcaacgcccgagatcgccaaggcgcttgaggcttattatggcgctggcggaaagacg
ttgtgggtatccggtggcgaactgaccgagcgcgccaacgccgccatcgctttcctggag
acggttggcgaaagcggtctcgatcccgccgattacagcatttccgcaccggccaaggat
gtgactgcgagtatcagcagcaatgttgccggcaccacatcgaacggcacaccggtcgag
acggcttcggcgcctgtttccgatgcctatcagcgggcgcagatgcagttcgagctggcg
ctgtccgccaaggttctcgcctatgtgcaggatacgacccgtggccgcgtcgatccgaac
cggctgtccggttaccatgatttcaagcgcaagacggtgaacctcgctcccgtgctgaag
cttgctggccttagcccagatgtggccgcttatttgcgcagccgcgagccctccagcgcc
gagtatcaggcgctgaaggcagagcttgcccgcctgcgtggcgagggcgatgccgcccat
gtcgttcgtgttcccgccgatctggtgctgaagcccggcaacagcagcgctgacatggcg
agtgtcgtcaaggctatcgaacatcgggcttctcccgccttcaaggcggaacatgccgca
acaatctccgcttaccagcagacgccggattacacgcctgatctcgtcgagctggtgaag
gcgttccagagcgaaaatggcctgaaggcggatggcgtcatcggtcgtgcgaccgtgcgc
gccatggtcggcgaaagcaacgacgcgaagatcgccaaggtgcaggtggccatggagcag
atccgctggttgccggccgatctcggccagcgttacgtcttcatcaaccagcccgctttc
atggcctattaccacaatgaaggcgtcgaacagttcggcatgaaggtcgtggtcggctcc
aaggccaatcagacctatttcttccaggatgaaatccagacggtcgagttcaatccctat
tggggcgtaccgcagtcgatcatcatcaacgagatgctgccgaagctgcgccgtgaccca
tcatacctcgatcgcctgggttacgaggtgcaggtgaatggccgtgcggtatcgtcttcc
agcgtcaactggtatggctcgaccaacgccgtttccgtgcgccagccgccgagcagcgac
aatgcgctgggcgacctgaaaatcctcttccccaacgcacatgccatctacatgcatgac
acgccggccaaaagcttcttcaaccgcgacatgcgggcgctgagccacggctgtatccgc
ctggtcgacccgcgccgcatggcggctgccgttctcggcaccagcgttgacaaggttggc
gagcagattgcgtcaggcaagaaccgcgccgtgcaggtgccggaaaagattccggtttat
gtggcctatttcaccgcctggccggatagggacggcaaggtccagttcttcgatgatgtc
tatgatcgcgacagctacgtgcagaaggcctttgcggtgacgacgaaggcaagggccagc
tcgatctga
DBGET
integrated database retrieval system
