Rhizobium sp. S41: BA939_02995
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Entry
BA939_02995 CDS
T05451
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rhv
Rhizobium sp. S41
Pathway
rhv00300
Lysine biosynthesis
rhv00470
D-Amino acid metabolism
rhv01100
Metabolic pathways
rhv01110
Biosynthesis of secondary metabolites
rhv01120
Microbial metabolism in diverse environments
rhv01230
Biosynthesis of amino acids
Module
rhv_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rhv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BA939_02995
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BA939_02995
Enzymes [BR:
rhv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BA939_02995
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
ANV22996
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Position
1:608015..609292
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AA seq
425 aa
AA seq
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MAPTDKPQSHGPALAAASFDISENDLVIGGLAVRDIVAETGTPCFLYDAGAMRRAYRDLQ
ATLSGFADIYYSVKANPLPAIIALFRQEGAGAEIASAGEYRAAIKAGVAPENIIFAGPGK
SRAELHEVITGGIGEIHVESAEEIARIEAIGKPVKASVRINPVPDAQAGAMRMGGKATAF
GFDEEELENILPLFRHAGVIDLVGIHIYGGTQILDADMLVSQWRHAIAIAARMAEMLGKP
LETIDLGGGLGIPYFAGEAPLDLAKVKAAVPDLKALLKAHPLIADAHVIVEPGRFLAGPG
GIYTAEVNSVKTSRGTTFVVTDGGMHHHLAASGNLGQIVKRNYPIVAPAMMQADHAETAT
VVGPLCTPLDTLARNAALPRLQAGDLIAILQSGAYGASASPGGFLSHAVAKEVLVENGAF
EMIGR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccacggataaaccccagagccacggtcccgcccttgcggccgcgtcattcgat
atcagtgaaaacgatcttgtgatcggcgggcttgccgtgcgcgatatcgtcgccgaaacc
ggaaccccatgctttctctatgatgctggcgcgatgcgccgcgcctaccgcgatctccag
gcgacgctctccggttttgccgatatctattattcggtgaaggccaatcccctgcccgcc
atcatcgcgctcttccggcaggaaggcgccggcgcggaaatcgcttccgctggcgaatat
cgcgccgctataaaggctggtgtcgcgcccgaaaacatcatctttgccgggcccggcaaa
agcagagccgaattgcacgaagtgatcacgggcggcatcggcgaaatccacgtggaaagc
gccgaggaaattgcccgcatcgaggcaatcggcaaacccgtcaaggcctctgtccgcatc
aatccggtgccggatgcgcaagccggcgccatgcgcatgggcggcaaggccaccgctttt
ggtttcgatgaggaagaactggaaaatatcctgccgcttttccggcatgcgggcgttatc
gatctcgtcggcatccatatctatggcggcacgcagattctcgatgcggacatgcttgtc
tcgcaatggcgacatgccatcgcaattgccgcccgcatggcggaaatgctcggcaagccg
cttgaaaccatcgatctcggcggcggcctcggcatcccctacttcgccggcgaagcaccg
ctcgatctcgcgaaggtaaaagccgccgtccccgatctgaaggcactgctgaaagcgcat
ccgctgatcgccgacgcccatgtcatcgtcgagcccggccgcttcctcgccggtccgggc
ggcatctatacggccgaagtcaattccgtgaagacctcgcgcggaaccaccttcgttgtg
acggatggcggcatgcaccatcacctggccgcttcgggcaatctcggtcagatcgtcaag
cgcaactatcccatcgttgcgcccgccatgatgcaggccgaccacgcggagactgcaact
gtcgtcggcccgctctgcacgccactcgatacgctggctcgcaacgcggcattgccgagg
ctccaggccggtgacctcatcgccatcctgcagtcaggcgcctatggcgccagcgccagc
cccgggggttttctaagccacgcggtggcgaaggaagtgctggtggaaaatggggcgttt
gagatgatcgggcgataa
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