Rhizobium sp. S41: BA939_03180
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Entry
BA939_03180 CDS
T05451
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rhv
Rhizobium sp. S41
Pathway
rhv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BA939_03180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhv03400
]
BA939_03180
Enzymes [BR:
rhv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
BA939_03180
DNA repair and recombination proteins [BR:
rhv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BA939_03180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ANV23029
LinkDB
All DBs
Position
1:647782..648579
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AA seq
265 aa
AA seq
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MKIATWNINGVKARIENLCQWLKDSSPDIVCLQEIKSVDEGFPRLEIEALGYHVETHGQK
GFNGVALLSKVKPDEVNRGLPGDDADEQARFIEGVFSVDGGAIRVCSLYLPNGNPPDDPV
KYPYKLAWMERLRRFAEDRLAFEEPLILAGDYNVIPEPFDCHDPRVWEGDALFLPKTRAA
FRKLENLGFTDAARATTDEAGLYSFWDYQAGAWPKNNGIRIDHLMLSAEAADRLESVSIE
KHVRAWEKPSDHVPVCGYFDFSPAG
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgccacctggaacatcaacggcgtcaaggcgcgcatcgaaaacctctgccag
tggctgaaggattcttcgcctgatatcgtctgccttcaggagatcaagtcggtcgatgag
gggtttccgcggctggagattgaggcgcttggttatcacgtagagacccacggccagaag
ggcttcaacggcgttgccctgctttccaaagtcaagcctgatgaggtcaatcgtggcctg
ccgggtgatgatgccgacgagcaggcgcgtttcatcgaaggcgtgttttccgtcgacggt
ggcgccatccgcgtctgctcgctttacctgccgaatggcaatccgcctgacgatccggtc
aaatatccctacaagctcgcctggatggagcggctgcggcgctttgccgaagatcgcctc
gcgttcgaggagccgctgatccttgcgggggactacaacgtcattccggaaccgttcgat
tgtcacgacccccgcgtgtgggaaggtgacgcgctgtttctgccgaagacccgcgcagcc
ttccgcaagctggagaacctcggcttcaccgatgccgcacgcgcgacgacggatgaagca
ggactatattccttctgggattatcaggccggcgcatggccgaaaaataacggcatccgc
atcgaccatctgatgctgtcagccgaagcagccgacaggctggaatcggtcagcatcgaa
aaacatgtgcgtgcgtgggaaaaaccatccgaccacgtgccggtctgcggttacttcgat
ttcagccccgctggctga
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