Rhizobium sp. S41: BA939_04530
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Entry
BA939_04530 CDS
T05451
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
rhv
Rhizobium sp. S41
Pathway
rhv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rhv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BA939_04530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhv03400
]
BA939_04530
DNA repair and recombination proteins [BR:
rhv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BA939_04530
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BA939_04530
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_16
AAA_22
Kinesin
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
ANV25123
LinkDB
All DBs
Position
1:899416..902385
Genome browser
AA seq
989 aa
AA seq
DB search
MARSPKNSTSSPSGFEEAPQSSFEGAPLGGSVADWVKQLEADAEASSVETQREIASKAGK
HRKKIEIEARKEAEKAATKTAKKTTASKTARGVSIGASSDPKTRAAAGLNPVAGLDVSLE
DAQSLAPGAVTATVDALSKLIESGNPLFKDGKLWTPHRPARPPKSEGGIAIEMVTDYKPS
GDQPTAIADLVEGLNSGDRSQVLLGVTGSGKTFTMAKVIEATQRPAVILAPNKTLAAQLY
SEFKNFFPNNAVEYFVSYYDYYQPEAYVPRSDTYIEKESSINEQIDRMRHAATRAILERD
DCIIVASVSCIYGIGSVETYTAMTFQMQVGDKLDQRQLLADLVAQQYKRQDINFVRGSFR
VRGDTIEIFPAHLEDAAWRISMWGDEIESITEFDPLTGHKTGDLQSVKIYANSHYVTPRP
TLNGAIKSIKEELKLRLAELEKAGRLLEAQRLEQRTRYDVEMLEATGSCAGIENYSRYLT
GRNPGEPPPTLFEYIPDNALIFIDESHVTVPQIGGMYRGDFRRKATLAEYGFRLPSCMDN
RPLRFEEWDAMRPQTISVSATPGGWEMEQSGGVFAEQVIRPTGLIDPPVEVRSARTQVDD
VLGEIRETAAKGYRTLCTVLTKRMAEDLTEYLHEQGVRVRYMHSDIDTLERIEIIRDLRL
GAFDVLVGINLLREGLDIPECGFVAILDADKEGFLRSETSLIQTIGRAARNVDGKVILYA
DNITGSMKRAMEETSRRREKQMAYNQEHGITPESVKARISDILDSVYERDHVRADISGVS
GKGFADGGHLVGNNLQAHLNALEKSMRDAAADLDFEKAARLRDEIKRLKAAELATMDDPM
AKEEARAVEGGGKNNRRSHLSISPVEGETSGRADGDAASTNESGKSLFAKPSLDEMGPGS
DAGKPLFRKNTLDEMTVGRTEKPVRGAVPDKPATEPGKRFSPLLEGQPERSTDDPRPLVR
GKIGAGSYEDAGEQKRKSRTKGKTGRPGR
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggccagatcaccgaaaaactccacctcctcgccctcgggcttcgaggaagctccgcaa
tcgtcattcgaaggcgcgccgctcggcggcagcgttgccgattgggtcaagcaacttgag
gcggatgcggaagcatcctccgtggagacccagcgcgaaatcgcttcgaaggcgggcaag
caccgcaagaagatcgaaatagaagcgcgcaaggaagcggaaaaggccgccacaaagacg
gcgaaaaagaccaccgcgtccaaaacggcgcgcggcgtttcgatcggcgcgtcgagcgat
ccgaaaacgcgcgccgccgcgggtctcaatcctgtagcagggctcgatgtctccttggag
gatgcccagtccctggcaccgggcgcggtgacggcgacggtggacgcgctttccaaactg
attgaaagcggcaacccgctcttcaaggatggcaagctttggacaccccacaggccggcc
cgtccgccgaaatcggaaggcggcatcgccatcgagatggtgacggactacaagccatcc
ggcgatcagccgaccgccattgccgatctcgtcgaaggcctcaattccggcgaccgctcg
caggtgctgctcggcgtcaccggctccggcaagaccttcaccatggccaaggtgatcgag
gccacacagcgcccggccgttattctggcgcccaacaagacgctggctgcccagctctat
tccgaattcaaaaacttctttccaaacaatgcggtggagtatttcgtttcctattacgat
tattaccagccggaagcctatgtgccgcgttccgacacctatatcgagaaggaatcgtcg
atcaacgagcagatcgaccgtatgcgccacgccgcaacccgcgccattctcgaacgtgac
gactgtatcatcgtcgcttcggtttcctgtatctatggtatcggttcggtcgagacctat
acggccatgaccttccagatgcaggtaggcgacaagctggatcaacgccagcttcttgcc
gacctcgtggcccagcaatacaagcggcaggacatcaacttcgtgcgcggctccttccgc
gtgcgcggtgatacgatcgagatcttccccgcccaccttgaagatgcggcctggcgcatt
tccatgtggggtgacgagattgaatccatcaccgaattcgacccgctgaccggccataag
accggcgacctgcaatcggtgaagatttacgccaattcgcactatgtgacaccgcgcccg
acgctgaacggcgcgatcaagtcgatcaaggaagagctgaagctgcgcctcgccgagctt
gaaaaagccggccgcctgctggaagcccagcgtctggaacagcgcacgcgctacgatgtc
gagatgctggaggccacgggctcctgcgccggcatcgaaaactattcacgctatctcacc
ggccgcaatccgggcgagccgccgccgaccctgttcgagtatattcccgacaacgcgctg
atcttcatcgacgaaagccacgtcaccgttcctcagatcggcggcatgtatcgcggcgac
ttccgccgcaaggcaacgctggccgaatatggcttccgcctgccctcgtgcatggacaac
cgtcccctgcgcttcgaggaatgggatgccatgcgcccgcagaccatttccgtctccgcc
acccccggaggctgggaaatggagcaatccggcggcgttttcgccgaacaggtcatccgt
ccgaccggcctcatcgatcctccggtcgaagtgcgctccgcccgcacccaggtggacgat
gttctcggcgaaatccgcgagaccgccgccaagggctaccgcacgctctgcaccgtgctg
accaagcggatggccgaagacctcaccgaatatctgcatgaacagggtgtccgcgtccgt
tacatgcactccgatattgacacgctggagcgcatcgagatcatccgcgacctgcggctc
ggcgctttcgacgtgctcgtcggcatcaacctgctgcgcgagggtctcgatattccggaa
tgtggtttcgtagccatcctcgacgcagacaaggaaggcttcctgcgctcggagacctcg
ctgatccagaccatcggccgcgccgcgcgtaacgtcgatggcaaggtcatcctttatgcc
gacaatatcaccggttcgatgaagcgggcgatggaggaaacctcccgccgccgtgaaaag
cagatggcctataaccaggaacatggcatcacgccggaatcggtcaaggcgaggatctcc
gacattcttgattccgtatatgaacgcgaccacgtaagagccgatatttcaggcgtttcc
ggcaagggcttcgccgatggcggtcatctggtcggcaacaatctccaggcccatctcaac
gcgctggaaaaatccatgcgcgacgccgcagcggacctcgactttgaaaaggcagcccgt
ctgcgcgacgaaatcaaacgcctcaaggcagccgaacttgccaccatggacgaccccatg
gccaaggaagaagcacgtgcggtcgaaggcggcgggaaaaacaacagacggagccacttg
tcgatttcccccgttgagggggagacatccggcagggcagacggggatgccgcttccacg
aacgaaagcgggaagtctctcttcgccaaaccttcgctggacgagatgggtccgggctcc
gacgcaggaaaaccgcttttccgcaagaacacgctggacgagatgaccgtgggccgtacc
gaaaagcccgtaaggggcgcggtgcccgataagcccgcgaccgaacccggcaagaggttc
tccccgctgctggaaggccagcccgaacgctccacggacgatccgcggccgctggtccgt
ggcaagatcggcgccggttcctatgaagatgccggagagcagaagcgcaaaagcaggacc
aagggcaagactggccgtccgggccgctga
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