Rhizobium sp. S41: BA939_05665
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Entry
BA939_05665 CDS
T05451
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rhv
Rhizobium sp. S41
Pathway
rhv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BA939_05665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhv03019
]
BA939_05665
Enzymes [BR:
rhv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
BA939_05665
Messenger RNA biogenesis [BR:
rhv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BA939_05665
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
ANV23476
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Position
1:complement(1147157..1148413)
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AA seq
418 aa
AA seq
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MNSLAGQDCFEKPALKRIFALLNADGGEVRIVGGAVRNALMGLPVVDIDMATTLTPDVVV
ARAKAAGIKAVPTGIEHGTVTLVIDGEGFEVTTLRRDVETNGRHAQVAFGSDWQTDAERR
DLTINALYADEKGEIIDLINGLPDIETGTVRFIGDAATRISEDYLRILRFFRFFAHYGSG
RPDADGLRASARAKDRLATLSAERVWSELKKLLSARDPSRALLWMRQSGVLTEILPETEK
WGIDAIHGLAATEQALGWAVDPMLRLAAIVPPDRERMASLAARLRLSKAEAAYLAHWASA
PPADPELKETALDRLLYRQGVEGVKTRLKLALASARADISAGETAMQKVARFSTLLARAE
KFQKPGFPLSGADVMAAGVAAGPQVGEVLKSLEEKWIDVNFSLDRAALTARLKEMLQD
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaacagccttgccggccaggactgtttcgaaaaaccggcgctgaagcgcattttcgcg
cttttgaatgccgatggcggcgaggtgcggatcgtcggcggcgcggtgcgcaacgcgctg
atgggcctgccggtggtcgatatcgacatggccacgacgctgacccctgacgtggttgtt
gcgcgggccaaggctgcgggtatcaaggcggtgccaacaggcatcgagcatggcacggta
acgctggtcatcgacggtgaaggtttcgaggtgacgacgctgcgccgcgatgtggagacc
aatggccgccacgcacaggtggccttcggctccgactggcagaccgatgccgagcggcgc
gatctcaccatcaatgctctttatgccgatgaaaagggcgagatcatcgaccttatcaac
gggttgcccgatatcgaaaccggaaccgtgcgcttcatcggcgatgcggcgacgcgaatt
tcggaagattatctgcggattctccgctttttccgcttttttgcccattatggctctggc
cgcccggatgccgatggcttgcgagccagcgcacgggccaaggacaggctggcgacgctt
tcggccgagcgggtgtggagcgagttgaaaaagctgctttcagcccgcgatccgtcccgc
gccctgctctggatgcggcaatcgggcgttctaacggaaattcttcccgaaaccgagaag
tggggtatcgacgccattcacggtctggccgcgacggagcaggctcttggctgggcggtg
gatccaatgctgcggcttgccgcgatcgtgccgccggatagggagaggatggcctctctg
gccgcgcggctgaggctgtcgaaggcagaagctgcctaccttgcccattgggcctcggcc
ccgccggcagaccccgaactgaaggagacggcgctcgaccggctgctttatcgtcaaggt
gtcgaaggcgtgaagacgcggctgaaactcgcgcttgcctccgctcgtgccgatatttcg
gccggcgagacagccatgcagaaggttgcacggttttcgacgctgctggcgagggcggag
aaattccagaagcccggatttccgttaagcggtgcagacgtgatggcagcgggcgtcgcg
gccggtccgcaggtcggcgaggtgctgaaaagccttgaggaaaagtggatcgacgtcaat
ttctcacttgaccgggcagcgctgaccgcccggcttaaagagatgcttcaggactga
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