Rhizobium sp. S41: BA939_08865
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Entry
BA939_08865 CDS
T05451
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rhv
Rhizobium sp. S41
Brite
KEGG Orthology (KO) [BR:
rhv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhv03400
]
BA939_08865
Enzymes [BR:
rhv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BA939_08865
DNA repair and recombination proteins [BR:
rhv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BA939_08865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ANV24043
LinkDB
All DBs
Position
1:complement(1843911..1847096)
Genome browser
AA seq
1061 aa
AA seq
DB search
MTGSHHAKRVLTIAAGTPFLKTLAETLCDGRLAAGYRYDPADPLSLAQVTIYVPTRRSAR
VLRSEFVDLLGGRSAILPLIRPLGETDDDSGFFDVENPEIMDLAPPISGTGRLIELARLI
LAWRNSLPDAIRAIHSDSPLVAPASPADAIWLARALAEVIDAMDTEEKDWEALQHLDAGD
HAQWWQLTADFLKIASIFWPARLAELNRSSAGRHRNAILRAEANRIATLPDTGPIIVAGS
TGSIPAAADLIAAVAALPQGVVVLPGLDLAMPEEQWQAIAEDPTDPSSRTHSQYGLYVLL
EKLGILRDDVVPIGVLDNDLEKRAAVFSAALAPAKSTSDWNRWREDRDSAIFDDAFAAAT
LIEAANEREEATAIAVALRLALEAPASGRPSQAALITPDRGLARRVATELQRFGIEADDS
AGTPLSATAQAGLTQLALEAILRPGDPVPIISLLKHPLARFGLSSEAFTRASKALELIAL
RGGRVETEVGNLETVLDTQLLAQREDRHPPAWRLALPDGSVDAARDLARRIAMATEPLRS
AFVRRDRSGRAFTDRLPLSDWAERTGRVMEAICGDENTDLAALWSGEAGDKLSGLFAELM
ESGDILDADGPQWIDIFAALVAGESIKPRSMRHPRIFIFGALEARLQSVDTVIIGGLNEG
LWPGQTANNPFLSRTMKTAIGLEPPERRIGQLAHDFEMANGTRHIFYTRALRQGSTPAVA
SRWLQRLLALGGEDFAKVLKKRGETYRHWAGLMDESIEQEAAKRPSPKPPAELQPTRYSF
SEVGRLRRDPYSIYARRILKLDALDPFNRDPNAADRGTLYHTIIERYSREGHIPGTSASL
SAMQRILDECFDAENLPPHVDVIWRPRFAAVARAFIDWEKERHPSIRHSFFEARAGQEIV
EAGIRLTGVADRIDIKTNGQADIIDYKTGLAPSVNQARALLDPQLALEAAALMRGAFREA
GSPTPENLIYVRLRPGERFFADQVNNEHSSRSGKRPPKSAIELATESIEQLTKFVHSLRN
GENGFASRLVPEEQQSYGGEYDHLARVSEWSTAEPGDGDDD
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgacgggctcccaccacgcaaagcgcgttctgacgatcgccgcgggaacaccgttcctc
aaaacgcttgcggaaacgctgtgcgacggaagactggcggcaggctatcgatatgacccg
gccgatcccctgtcgcttgcccaggtgacgatatatgtgccgacgcggcgttcggcccgc
gtgctgcgctcggaattcgtcgatcttcttggcggccgttccgccattctgccgctcatc
cggccccttggcgaaacggatgacgacagcggtttcttcgatgtcgaaaaccctgagata
atggatctcgcgccgccgatttccggcaccggccgactgatcgaactcgcgcgtctcatt
cttgcatggcgcaacagcctgccggacgccattcgggcgatccattccgattcgccgctg
gtcgcccccgccagcccggccgacgcgatatggctcgcgcgtgcgctggcagaggtgatc
gacgcgatggatacggaagaaaaagattgggaagcgcttcagcatctcgatgccggtgat
cacgctcaatggtggcagctcacggccgattttctaaagatcgccagcatcttctggccc
gcccggctcgccgaactcaacagatcttcggccggacggcaccgaaacgccatcctccgg
gcagaagcgaaccgaattgccacattgccggacaccggtccgatcatcgttgctggctcg
acaggctccattccggccgccgccgatctcatcgccgcggttgcagctttaccgcaaggc
gtggtggtgcttccggggcttgatcttgccatgccggaagagcaatggcaggcgatcgcc
gaggaccccaccgatccttcgagccgcactcactcgcaatacgggctttatgtcctgcta
gagaaactgggcatcctgcgtgacgatgtggttccgatcggtgtcctcgataacgatctg
gaaaagcgcgccgcggtgttttcggcagcgcttgcgccggccaaatccaccagtgactgg
aaccgatggcgtgaagaccgggattccgcaatttttgacgatgcctttgcagcggccacg
ctgattgaagctgccaacgagcgcgaagaggccaccgccatcgcagtggcactcaggctt
gcgctcgaagcaccagcctcgggacggccttcgcaggcggccctgataacacccgaccgc
gggctggcgcggcgcgtggcaacggagttgcaacgcttcggcatcgaagccgacgattcc
gccggcacgccgctttcggcaaccgcccaggccggcctcacgcaactcgcgctggaggcg
atcctgagacccggagacccggtgccgattatctcccttctgaaacacccgctcgcccgt
ttcgggctctcgagcgaagctttcaccagagcttcgaaggcgcttgagctgattgcgctg
cgaggcggccgcgtcgaaactgaagtgggcaatctggaaacggttcttgacacccaactc
cttgcgcaacgcgaggacagacatccgcccgcctggcggctggccctgcctgacggaagc
gttgacgccgcgcgcgatctggcgcgacggattgcaatggccacagagccgctgcgctcc
gccttcgtccgccgcgaccgatctggccgggcctttaccgacaggttgcctctttccgac
tgggcggaacggaccggccgcgtgatggaagccatctgtggggatgaaaatacagatctt
gccgctctctggtccggcgaggccggagacaagctttccggcctctttgccgaactgatg
gaaagcggagatattctcgacgcggacggtccgcaatggatcgatatattcgcggcgctt
gtggcaggggaatcaatcaagccaagatcgatgcgccatccgcgcatcttcatcttcggc
gcgctggaagcgcggctgcaaagtgtcgatacggtcatcatcggcggtctcaatgaaggc
ctctggccgggccaaacggcgaataatccgtttctttcccgcaccatgaagactgcgatc
gggctggagccgccggaacggcgtatcggccagctcgcgcatgactttgagatggccaac
ggcacgcgacacattttctacacccgggcgctcaggcagggctccacgcctgccgtcgcc
tcacgctggctacaaaggctgctggccctgggcggcgaggattttgccaaggtccttaaa
aaacgtggcgagacatatcgccattgggcgggtctgatggatgagagcatcgagcaggag
gcggcaaagcgcccttccccgaaaccgccggctgaattgcagccgacgcgttactccttc
agcgaagtgggccgcctgcgccgcgacccctattcgatctatgcgcggcgcattctgaag
ctcgacgcgcttgacccgttcaaccgcgacccgaacgcagccgatcgtggcacgctctac
cacacgatcatcgagcgctattcccgtgaggggcacattcccggtacgtcggcctcgctt
tcggccatgcagcgcattctcgacgaatgtttcgatgctgaaaacctgcctccccatgtg
gatgtgatctggcggccacgttttgcagcggtggcgcgcgccttcatcgactgggaaaaa
gaacgtcatccatccattcgtcacagctttttcgaggcgcgcgcgggccaggaaatcgtc
gaagcaggcataaggctcacaggcgtcgccgaccgcatcgacatcaagacaaacggtcag
gcggatattatcgactacaagacggggctcgcgccttccgtcaatcaggcgcgcgctctg
ctcgatccgcagcttgcgctggaggcggcagcattgatgcgcggcgccttccgcgaagcc
ggttcacccacgcctgaaaacctcatctatgttcgcctgcggccgggcgagcgttttttc
gccgatcaggtcaataacgaacattccagccgaagcgggaaaagaccgccaaaatcggcg
attgagctcgcgacggaatcgatagaacagctcaccaaattcgttcattcgctgcgcaac
ggggaaaacggcttcgcctcgcgcctggtgccggaagaacagcaatcctacggcggggaa
tatgatcacctcgcccgcgtttcggaatggtcgacggcagaaccgggagacggcgatgac
gattga
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