Rhizobium sp. S41: BA939_09145
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Entry
BA939_09145 CDS
T05451
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rhv
Rhizobium sp. S41
Brite
KEGG Orthology (KO) [BR:
rhv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhv03016
]
BA939_09145
Enzymes [BR:
rhv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BA939_09145
Transfer RNA biogenesis [BR:
rhv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BA939_09145
Prokaryotic type
BA939_09145
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Zf-C2H2_ZNF451_5th
Motif
Other DBs
NCBI-ProteinID:
ANV24088
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All DBs
Position
1:complement(1907203..1908150)
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AA seq
315 aa
AA seq
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MSKPRKQQNRKPKGRPISGWLILDKPLDFGSTEAVSKIKWLFNAQKAGHAGTLDPLASGM
LPIALGDATKTVPYVMDGRKIYEFTVTWGEQRTTDDLEGEVVESSDQRPDEQAIRDLLPN
YTGVIMQTPPQFSAIKIAGERAYDLARDGETVEIPAREVEIHRLTLLACPDADTAHFEVE
CGKGTYVRALARDMGRDLGCFGHISELRRTMVAPFGEDMMVPLETLTALEAVEDRDERLE
ALDAYLIDTAEALSALPRLIINDDQAHRLKMGNPILLRGRDAPASHPEAYATAHGKLVAI
GEIGEGEFRPKRVFG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccacgcaaacagcagaaccgcaaacccaagggccgtccgatttccggttgg
ctgatcctcgacaagccgctcgatttcggctctaccgaggccgtctccaagatcaagtgg
ctgttcaatgcccagaaggcaggccatgcgggcacgcttgatccgctggcctccggcatg
ttgccgatcgcgcttggtgacgccaccaagaccgtgccttacgtcatggacggccggaaa
atctacgaattcacagtgacctggggcgagcagcgcacgacagacgatctggaaggcgaa
gtggtcgaatcttccgatcagcgcccggacgagcaggcgatccgcgatcttctgcccaat
tataccggcgtgatcatgcagaccccgccgcaattctccgctatcaagatcgccggtgaa
cgcgcttatgatctggcacgtgacggcgagaccgtggaaattcccgcacgcgaggtggaa
atccatcgcttgacgttgctggcctgcccggatgccgatacggcccatttcgaagtggaa
tgtggcaaaggcacctatgtgcgggcgcttgcgcgtgacatgggccgcgatctcggctgt
ttcggccatatctcggaactgcgccgcaccatggtcgctccattcggcgaagacatgatg
gtgccgctcgaaacgctcaccgcgcttgaagccgttgaagaccgcgacgagcggctggaa
gcgctggacgcctatctgatcgacacggccgaagcgctttccgcccttccccgccttatt
atcaatgacgaccaggcgcaccggctgaagatgggcaaccctatcctgctgcgcgggcgc
gatgcgccggccagccatccggaagcctacgctacggcacatggcaagctggtcgccatt
ggcgaaatcggcgaaggcgagtttcgcccgaagagggttttcggctga
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