Rhizobium sp. S41: BA939_10075
Help
Entry
BA939_10075 CDS
T05451
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
rhv
Rhizobium sp. S41
Brite
KEGG Orthology (KO) [BR:
rhv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhv03016
]
BA939_10075
Enzymes [BR:
rhv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
BA939_10075
Transfer RNA biogenesis [BR:
rhv03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
BA939_10075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ANV24248
LinkDB
All DBs
Position
1:complement(2096315..2097031)
Genome browser
AA seq
238 aa
AA seq
DB search
MSFELTDNGGSGQLFLEGFDLEKQRRVNPRFGNKVLIVLKPPVALAERIFTDASCHAAGR
TKRAAHPAELLHITLLCVGCFDTVPRGFANRLKAALGEIRARPVPITFDGSSLFGNRSCL
ALSSRREMLELRALAKMVQRALWRANLPFVAASSFTPHLTVVYGCGKIDIMPVEKPYSWL
AGSFELIFSHNGETRHESLGRFPLSAKADRYEQPESQLYLPEKIFRPQKRSAHKMAAR
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
gtgagtttcgagttgacggataatggagggtcagggcagcttttcctcgaaggattcgat
ctggagaagcagcgacgggtcaatccgcgatttggcaacaaggtcttaatcgtgctgaag
ccgcccgtggccttggcggagagaattttcaccgatgcatcgtgccatgccgccgggcgg
acgaagcgggcggcccatccagccgagcttctgcatatcaccctcctttgcgtcgggtgt
ttcgacaccgtgcctcgcggttttgcaaaccggctgaaggcggcactgggggaaataagg
gcgcgtcccgttccgattacgttcgatggcagctcgcttttcggcaatcgcagctgtctg
gcgctaagcagccgccgcgagatgctggagctcagagcattggcgaagatggtgcagcgc
gcgctttggcgggccaatctgccctttgtcgccgcatcgtcgttcacgccgcatctcacc
gtggtctatggctgcgggaaaatcgacatcatgcctgttgaaaaaccatatagctggctg
gcgggcagcttcgaactcatcttcagccataatggagagacgcggcacgaatctctcggg
cgcttcccgctttcggcgaaagcggaccgctatgagcagccggaaagtcaattatatctg
ccggaaaaaatattcaggccgcagaagcggtcggcgcacaagatggcggcgcgataa
DBGET
integrated database retrieval system
