Rhizobium sp. S41: BA939_17390
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Entry
BA939_17390 CDS
T05451
Name
(GenBank) diguanylate cyclase
Organism
rhv
Rhizobium sp. S41
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_4
PAS
PAS_9
Motif
Other DBs
NCBI-ProteinID:
ANV27504
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Position
2:complement(561109..563283)
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AA seq
724 aa
AA seq
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MSRKKRETGPSASTPTDENSNPSDRHVLLEAMIDHVPDFIYAKDLEGRFLFANRAIVKEN
GFDTVEELIGLTDYDIHGEAARRAGIPDTEARVMRTGEPDLGYEERAMRGDIDRWLMMSR
VPLRDKSGNIIGVVGASRDITQKKASERLLQTQARILEMIVAAARIEDFLEEFVKAIENL
ATGLACAVRVFDAATGEPSVYASPALAPHAGLTALISSVSDPDIITSPADNTAFSFDIPA
SDGKAHGFVWCMLAARQPDPALVEFIGAAARMAGLAIDRKRAAEHIAFLADHDMLTRLPN
RRFLDTRLPEVLAAAAKARRTIAVCFLDLDNFKQINDTLGHSVGDALLSKTAARIAGSLG
RNDLVLRVGGDEFVVILEKQRNGFESRLQGIQAAVSQPLRIGNYDIKATSSIGVAFFPEH
GETTAEIVAAADLAMYQAKHNGRDGIATFSPRMADDLRKKVTRIEELRRAVERDEFILHF
QPQVDLLTGGISGVEALVRWQHPAEGLLGPAEFIGLAEETGLIVELGESILKKACRQARD
WMAAGLSPVKMAVNISPRQFQAGLADQISSVLKETGLAPSLLEIEITETLIIQDVDTSVR
IMRAIKQMGVSLALDDFGIGYSCLGMLKTFPLSCMKIDRSFLTHLPAKTKDSAIVSIMIQ
LAGSLGIDVIAEGVETAEQADFLRAAGCPYGQGYYFGRPVAAGEIEGMLKAMPTFATGSS
SQPL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atatcgcgaaaaaagcgcgaaacagggccatctgcctctaccccaacagatgaaaatagt
aatccatccgaccggcatgtgttgttggaagcgatgatcgaccacgtgccggattttatc
tatgccaaggatctggaaggtcgtttcctgtttgcgaaccgcgcaatcgtcaaggaaaat
ggttttgacacggtggaggagctgattggcctcaccgattacgatattcacggcgaagca
gcacggcgggcgggcattcccgacaccgaggcacgggtgatgcgcacgggagaaccggat
ctcggttacgaagagcgggccatgcgcggcgacattgaccgctggctgatgatgtcgcgc
gtgccgctgcgggacaagtccggcaacatcatcggggtggtcggcgcttctagggacata
acccagaaaaaggcttccgaaaggctgctgcagacgcaggcgcgcattctcgaaatgatt
gtcgcggcggcgcgtatcgaggatttcctagaggaattcgtcaaggcgattgaaaatctc
gccacggggcttgcctgtgccgtacgggtgttcgacgccgctacgggtgaaccttcggtt
tatgcatcgccggcactcgctccgcatgcggggctgacggcgctgatttcctcggtcagc
gatcctgacatcatcacttcccctgccgataacacggccttcagcttcgatattcccgcc
agcgacggcaaggcgcacggttttgtctggtgcatgctcgcggcccgccagccagatccg
gcactggtggaatttatcggtgcggctgcacgcatggcggggctcgcgatcgaccgcaaa
cgtgctgccgaacatatcgcctttctggccgatcacgacatgctgacccggctccccaat
cgccgttttctcgatacacggctgccggaagttcttgcggccgcggcaaaagccaggcgg
acgatcgccgtctgctttctcgacctcgacaatttcaagcagatcaacgacacgctgggc
cacagcgtcggcgatgcgctgctttcgaagacggcggcgcgcattgcagggagcctcggt
cggaacgatctcgtgttgcgggtgggcggggatgagttcgtcgtcattctggagaagcaa
cggaacggtttcgaatcccggcttcagggcatccaggctgcggtctcacagccgctgcgc
atcggcaattatgatatcaaggcgacatccagcatcggcgtggcgttttttccggaacat
ggggaaaccacggcggagatcgtcgccgctgccgatcttgccatgtatcaggcgaaacat
aatggtcgggacggtatcgccaccttctcgccgcgtatggcagacgatttgagaaagaag
gtcacgcgtatcgaggaattgcgcagggccgtggaacgggatgaattcatcctgcatttc
cagccgcaggtcgatctacttaccggcggaatcagtggggtggaggcgctggtgcgctgg
cagcatccggcggagggactgcttgggcctgcggaattcatcggccttgcggaagaaacc
ggcctcatcgtggagcttggggagagcattctgaaaaaagcgtgccgtcaggcgcgagac
tggatggctgctggattgtcgcctgtcaaaatggcagtcaatatctccccccggcagttc
caggccggcttggcggaccagatcagttcggtgctgaaggaaaccggccttgcaccttcg
ctgctggaaatcgagattaccgagacgctcatcattcaggatgtcgacacgtcagtgcgc
atcatgcgcgccatcaagcagatgggcgtcagcctggcactggatgacttcggcatcggc
tattcctgtcttggcatgctcaagacattccctctttcgtgcatgaagatcgaccgctcg
ttcctcacgcatctgccggcaaaaaccaaagacagcgccattgtttcgatcatgatccag
cttgccggttcactgggcatcgatgtcattgccgaaggcgtggaaacggccgagcaggct
gactttctgcgcgctgccggttgtccctacgggcaaggttactatttcggccgccccgtg
gcggctggcgagatcgagggcatgctgaaggcgatgcccacatttgcaaccggttcttcc
agccaaccgctgtaa
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