Rhizobium sp. S41: BA939_19070
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Entry
BA939_19070 CDS
T05451
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP(+))
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
rhv
Rhizobium sp. S41
Pathway
rhv00250
Alanine, aspartate and glutamate metabolism
rhv00310
Lysine degradation
rhv00350
Tyrosine metabolism
rhv00650
Butanoate metabolism
rhv00760
Nicotinate and nicotinamide metabolism
rhv01100
Metabolic pathways
rhv01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rhv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
BA939_19070 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BA939_19070 (gabD)
00310 Lysine degradation
BA939_19070 (gabD)
00350 Tyrosine metabolism
BA939_19070 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
BA939_19070 (gabD)
Enzymes [BR:
rhv01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
BA939_19070 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
BA939_19070 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
BA939_19070 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
ANV27528
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Position
2:947027..948484
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AA seq
485 aa
AA seq
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MQGLKDRDLFRQAGLIGGAWKAAASGKAVDVIDPATQAVIGSVPDMGGGETRAAVEAADA
AFGPWRKKTHAERAALLEKWFALMIEHMDDLALILTTEQGKPLEEAKGEIRYGASFVKWF
AEEARRIGGSTIPSPTPDRRIVVLKEPVGVCGIVTPWNFPNAMITRKVAPALAAGCTVVI
KPSEFTPYSALALGVLAERAGIPAGVINIVTGMPTDIGNEIMANETVRKISFTGSTRVGS
LLMRGAADSVKRLSLELGGNAPFIVFDDADLDLAVEGALVSKFRNGGQTCVCANRILVQA
GVYDAFAKKLADRVDAMRVGPGTEAGVAIGPMINEPAIAKIRAHVEDAVAKGAKIITRPR
PLPEGPQYTAPIVLTGATTGMRLASEETFGPVAPLFRFETEEEAIAIANGTPFGLAAYFY
TESLRRAWRVGEALEFGMVGLNTGAISTEVAPFGGVKQSGLGREGAQVGIEEYLEIKTFH
IGGLA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtttgaaggacagggatctctttcgccaggccggcctgatcggcggcgcatgg
aaggcagcggcatcgggcaaggcggtcgacgtgatcgacccggcaacgcaggcagtcatc
ggcagcgtgccggatatgggcggaggggaaacccgggcggcggtggaggccgccgatgcg
gccttcggcccctggagaaaaaagacccatgccgagcgggcggcccttctcgaaaaatgg
ttcgccctgatgatcgagcatatggacgatcttgcgctgatcctgaccacggaacagggc
aagccgcttgaggaggcgaagggagaaatccgctatggcgcatccttcgtcaaatggttc
gcggaagaagctcgccgtattggcggcagcaccatcccttcaccgacaccggaccggcgc
attgtggtgctgaaagaaccggtcggcgtctgcggcatcgtcaccccgtggaactttccg
aacgcgatgatcacgcgcaaggttgcacccgcacttgccgccggctgcaccgtcgtcatc
aagccttctgaattcacgccctattcggcactggcgctcggtgttctcgccgaacgggcc
ggtattcccgctggtgtcatcaacatcgtgaccggcatgccgaccgatatcggcaacgaa
atcatggcgaatgagacggtgcggaaaatttccttcacgggctcaacccgcgttggctca
ctcctgatgcgaggcgctgccgacagtgtaaagcggctctcgctggaactgggcggcaac
gcgcccttcatcgttttcgacgatgccgatctcgatctggccgtggaaggcgcgctcgtt
tcgaagttccgcaatggtgggcagacctgcgtctgcgccaaccgcattctcgttcaggca
ggcgtttatgacgcctttgcaaaaaaactggcggatcgcgttgatgccatgcgcgttggt
cccggaacggaggccggtgtggccatcggcccgatgatcaatgagccggccatagcgaag
atccgcgcccatgtggaagatgccgtggccaaaggtgcgaagatcatcaccagaccccgc
cctctaccggaaggtccgcaatacaccgcccccattgtgctgaccggcgcaacgaccggc
atgcgtctggcaagcgaagagaccttcggcccggtcgctcccctcttccgttttgagacg
gaagaagaggcgatcgccatcgccaacggcaccccgtttgggcttgcggcctacttctac
actgaaagcctcagacgcgcctggcgcgtgggtgaagcgctggaattcggaatggtgggc
ctcaacaccggcgcgatttccaccgaggtcgcgccttttggcggagtcaagcaatccggc
cttggccgcgaaggcgcgcaggtcggcatcgaagaatatctggaaataaagacgttccat
atcggcggacttgcctga
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