Rhizobium sp. S41: BA939_20555
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Entry
BA939_20555 CDS
T05451
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rhv
Rhizobium sp. S41
Brite
KEGG Orthology (KO) [BR:
rhv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhv03016
]
BA939_20555
Enzymes [BR:
rhv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BA939_20555
Transfer RNA biogenesis [BR:
rhv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BA939_20555
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ANV26332
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All DBs
Position
2:1264209..1264835
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AA seq
208 aa
AA seq
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MAAPIRYHEGDISAEDAARYTGAIAIDTETLGLVPRRDRLCVVQLSPGDGTADIIRIAAG
QKEAPNLVRMLADPAHQKIFHYGRFDIAVLFHTFGVTTTPVFCTKIASRLTRTYTDRHGL
KDNLKEMLEVDISKAQQSSDWAAQTLSPAQLEYAASDVLYLHALRDKLTARLIRDGRLDH
ADACFAFLPTRAKLDLLGWDETDIFAHS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacccatccgttatcacgaaggcgatatttccgccgaagatgccgcgcgctat
accggcgccatcgccatcgatacggaaacgctggggctggtgccgcgtcgcgaccgcctc
tgcgtcgtccagctttcgccgggcgacggcacggcagacatcatccgcatcgccgctggg
cagaaagaagcgccgaacctcgtgcgcatgcttgccgatcctgcccaccagaagatcttt
cactatggccgtttcgatatcgccgtgcttttccatacgttcggtgtgacgaccacgcct
gtcttctgcaccaagatcgcttcacggctgacccgcacctatacggaccggcacgggctg
aaggacaacctcaaggaaatgctggaggtcgatatttccaaggcgcagcaatcttctgac
tgggcagcgcaaacgctttccccggcgcagctcgaatatgccgcttccgacgttctttat
ctgcatgcgctgcgcgacaagctgacggcgcgtctcatccgcgacggccgccttgatcat
gccgatgcctgtttcgcgtttttaccgacccgtgcgaagctagacctgctcggctgggac
gaaaccgacattttcgcccatagctga
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