Rhizobium sp. S41: BA939_20905
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Entry
BA939_20905 CDS
T05451
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rhv
Rhizobium sp. S41
Brite
KEGG Orthology (KO) [BR:
rhv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhv03032
]
BA939_20905
03400 DNA repair and recombination proteins [BR:
rhv03400
]
BA939_20905
Enzymes [BR:
rhv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BA939_20905
DNA replication proteins [BR:
rhv03032
]
Prokaryotic type
DNA Topoisomerases
BA939_20905
DNA repair and recombination proteins [BR:
rhv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BA939_20905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ANV26393
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All DBs
Position
2:1340915..1341931
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AA seq
338 aa
AA seq
DB search
MPQPPTRLLAKIGLAYVSDQEPGISREKRGRGFCYRLPGGELLCDSDELKRIKSLGVPPA
YKDVWICIDPSGHLQATGFDARGRKQYRYHPDWHTLRGETKFFQLKSFGRALPAIRRRAM
ADVGKQDHGQEMTLAALTLLLDAAYLRVGNRSYLESNGTYGATTLLKRHVSFGETIELRF
AAKGGQKVKRQLRHPRLQKILEEIADLPGKELFVWQDSENRVHSVDSSDLNAYLSRIGGQ
GISAKTFRTWGGTLAAFCNAMEHVAAGEKPSIKGMCQAAATELSNTPAICRKSYVHPAVL
DIATEEKAQKKLSRILKVGAKPVSGLRADERRLLAFLP
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgccacagccgccaacccgccttcttgccaaaatcggacttgcctatgtcagtgatcag
gaaccgggtatttcccgcgagaaacgcgggcgcggtttctgttaccggctgccgggcggc
gaactcctctgcgatagtgatgagctgaagcgcatcaaatcgctcggtgtaccgcccgcg
tataaggatgtctggatctgcatcgacccgtcggggcatctgcaggccaccgggtttgat
gcccgcggccgaaagcaatatcgttatcatcccgactggcatacgctcaggggagaaacg
aagttcttccagctcaaaagcttcggaagggcgctccctgccatccgccgtcgcgccatg
gccgacgtcggtaaacaggaccacggccaggaaatgacgcttgcagccctcaccctgttg
cttgatgccgcctatttgcgcgtcggaaatcgctcctatctcgagagtaacggcacctat
ggcgcaacgacactgctcaagcgccacgtttccttcggtgaaacgattgaactgcgcttc
gccgccaaaggcgggcagaaggtgaaaaggcaattgcgacacccgcggctacagaaaatc
ctggaggagattgccgatcttcccggcaaggaactcttcgtctggcaggatagtgaaaac
cgggttcactccgtcgattccagcgatctcaacgcatatctctcacgcatcggcggccag
ggcatttccgccaagaccttccgcacctggggcggaacgctcgcggccttctgcaacgcc
atggagcatgtggcagccggtgaaaaaccgagcataaaaggcatgtgccaggctgcggcg
accgagctttccaatacgcctgccatctgccgcaagagctatgtgcaccccgctgttctc
gatatcgccacggaggaaaaggcccagaaaaagctcagccgcatcttgaaggtcggggca
aaacccgtctccggcctcagggcggacgaaagacgcctgctggcctttttaccctga
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