Rhizobium sp. S41: BA939_25170
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Entry
BA939_25170 CDS
T05451
Name
(GenBank) RTX toxin
Organism
rhv
Rhizobium sp. S41
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
Big_9
Cadherin_5
Cadherin_4
Metallophos
Cadherin_3
HCBP_related
He_PIG
Motif
Other DBs
NCBI-ProteinID:
ANV27146
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All DBs
Position
2:2209732..2215665
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AA seq
1977 aa
AA seq
DB search
MTTSQNSIANPIETSSDWLLKIPDLSQQQSILVSPGGTGTVTSYSLVYDVYFPSGGSTEW
IPFLQTDLTNSNDGDIFGSASSASYGIGIGGNYRGTAKLDAWNRIGVTIEKNSNGTVSMN
KYVNGDYIATQQISSNPGRFAIDLSKGFLIFSDEDGDTSPGYLSNFLFLQKVLTKAEMSY
LGAAKASGILPDVMKQAAEQTGALEVRFSEGSAAPAIGTGTITAKGTTLEFTTPAKANVL
GIGETAPVDPSAVAKTAMIKDMMVTPDAANVTIDLSKYFSGEKLTFTVQNSENKVVNAVL
AEGNKLTLDFAELGHSDIRVTATDAAGKSMADDFRVRVAGPNAYTIAVFPDTQDYTSNDG
IKHLFGDMTQWLVDNRQSHNIVFMSHVGDITQNNQSSEWDIAEAALRKLDGKLPYALLPG
NHDQGSSGNAANHSSDQLDSRFSAAKQAATNAGTFGGAYDQEQAAARNTYSTFTAPDGTK
WLSISLEFGPRDDVIRWAGDVIEKFPDHRVMLATHSLTSYAGRQDNLALPLYDEGAGYDY
GMRTDQRGANDGEYVARVLLSRYPNIVMTFSGHIFGDGAETDITYNQYGEPVFQFLVNYQ
NGVSREITGNGIESRGNNGGNGAIRLITIDPDNNRISTETYFTAFDDYLDGYRSKPEIDR
NGLTGYYRGHQEVFENVYVGAGKARAMADAGDDIVASAAAGASKASVNLSAAKSLLSADI
KKFVWTDKNGDVVAEGKEAVADLSLGKHKLTLTATDANGVKTTDKIDVLVRGDRTLLVEN
FNDGKADGWATNFGATDGNTGNFLLKGTVFSRSSTTDGLAAPEAALFDQSDATGNKLVYI
GGQSAGWSDYVLEATLIQLDNDAIGVYFYYKDANNYYRFSMDGETNRRQLIKVSGGNEVL
LASVNEGVQYNMELPLTVSVVGGVINVFLGDKNVFSGPVVDATSPLSSGTVGVYSSGQRA
SVFDDIVVTRAVTTAKAGIDQRVYDLDGDGKASVTLDASGSFGPEHLTGFVWTDLDGNVV
ATGKKVDVALDTGINRLILKVTSANGAVSTDRVDVTVVEKAKILVAEDFSSAEAMARFKI
VDEGEFGGIGPDGKSSEWLISNGRLVQTTELASRELTWSGATNSDYWKRGWSPMGDGVNV
LRLGTYALFNDPAALAWTDYAIETTFQTPDKDGLGFLFRYKDSKNYYKLELDADGILDRT
PSNGAGSIFNLVRMRNGIEEILAQVPGKYEPGQDTKLRVEVIGDKITAFLNEEALFAYPI
GDRELDAGTFGLYSWGNKGLAFDNLTVVNLKSGLEAGTTINGTEARDTLVGTDADETIFG
HGGDDRLIGNAGNDRLAGGDGNDVLMGGAGRDALSGGNGDDVLFGNEGNDIVSGGLGDDV
IEGGTGNDLLLGGDGSDTYVYGRGDGSDDIVETAGATGDKDILVLHDIARNEAVLHKFGD
NVEIEFGNGEKISLRNQLAGGGVELVTFADGTLLNRDAIVKGLVNRGPVAAADTLAAVDE
DAASFLISFATLLANDKDADLDQLAVTGVSLVAGGTAVLEENGIRFTTAADFNGTASFSY
RITDGRGGSSEATASFTVKPVNDAPVAASIAVKTEEDVVLKGKVVASDIDGDTLTFAIKA
DAGAAKGEVKIDAATGEWVYAPNANVNGTDSFTVVVSDGKGGSAESVVSVTINPVNDAPV
AVDDRITVSEKDSASFDLVANDTDVEGDRLTLISVAVAGVAGLALTSEQAAAAFSVVDGK
LVVDPSSAFAALEDDQQAVVTLTYTVRDASGGEAHGTTTVTVDGYTEYTIVSGTDGNDVL
VAGDGKDMLEGGDGNDTLLAGAGNDMVDAGAGNDRVVAGDGNDIVEGGAGNDVLMGGAGN
DVLHGGAGNDQLNGGSGDDTLIGGAGNDVLTGGSGADTFVFAAGSGRDVVTDFQAGADGK
DVVELSKDVFADYQAFIASGVFTDGDHGAEIAFKDGSTITFDGVKTEQFVIDDFRFA
NT seq
5934 nt
NT seq
+upstream
nt +downstream
nt
atgacgacctcacaaaactcgatcgccaaccccatcgaaacctcttccgactggctgctg
aagatcccggacctctcgcagcagcagagcattctcgtttcgcccggtggcaccggcacg
gtaacgtcctacagcctggtatatgacgtctatttcccttcgggcggctccaccgaatgg
atacccttccttcagacggatcttaccaacagcaacgacggtgacatttttggctctgca
agcagtgccagctacggtatcggcatcggcggtaattatcgcggcacggccaaactggat
gcctggaaccgtattggtgtcacgatcgaaaagaattcgaacggcaccgtttcgatgaat
aaatacgtcaatggcgactatatcgcgacccagcagatatcgtccaatccgggacgcttc
gccatcgacctgtccaaaggcttcctgatcttctcggatgaggatggcgatacatctccc
ggctatctcagcaatttcctctttctccagaaagtgctgacgaaggccgaaatgtcctat
ctgggcgcagcaaaagcatcgggtattctgccggatgtaatgaagcaggcggcagagcag
acaggcgctctcgaagtccgtttctcggaaggctcggccgcacccgcaatcggcacggga
acgattaccgcaaagggcaccacgctcgaattcacgacgcctgcaaaggctaacgtcctg
ggaattggcgagacggcccctgtcgatccgtcggccgtggcaaaaactgccatgatcaag
gacatgatggtgacgcccgacgcggcaaacgtgacgatcgatctgtcgaagtacttctcc
ggcgaaaagcttacctttaccgtgcagaacagcgaaaacaaggtcgtgaatgcggtcctt
gcggaaggcaacaagctgacgcttgactttgccgaactcggccattccgacattcgtgtg
accgcgacggacgctgccggcaaaagcatggccgacgactttcgtgtgcgtgtggccggc
ccgaacgcctatacgatcgcggtttttccagacacgcaggactatacctcgaacgatggc
atcaagcatctcttcggcgacatgacgcagtggctggtcgataaccgccagagccacaac
atcgtcttcatgagccatgtgggcgatatcacccagaacaaccagtcgtccgaatgggat
attgccgaagctgcgctgcgcaagctcgatggcaagctgccctatgcgctgcttcccggc
aatcacgatcagggctcgtccggcaacgccgcaaaccattcttccgaccagctggacagc
cgtttctcggctgcaaagcaggcggcgaccaatgccggcaccttcgggggcgcttacgat
caggaacaggccgccgcccgcaacacctacagcaccttcaccgcgcctgatgggaccaag
tggttgtccatttcgctcgaattcggcccgcgcgacgacgtgatccgctgggcgggcgat
gtgatcgagaagtttcccgaccatcgcgtgatgctcgcaacgcattcgctgacgagctat
gccggccgtcaggacaatctggccttgccgctctatgacgaaggcgccggctacgattac
ggtatgcgcaccgaccagcgcggcgcaaacgacggcgaatatgtcgcccgcgtcttgttg
tcccgttatccgaacatcgtcatgaccttctccggtcacatcttcggcgatggcgcagaa
accgacatcacctacaaccagtatggcgagccggtcttccagttcctggtcaactaccag
aacggcgtatcccgcgaaatcaccggtaatggcatcgagtcgcgcggcaataacggcggc
aacggcgcgatacgcctgatcaccatcgatccggacaataaccgcatctccaccgaaacc
tacttcaccgccttcgacgattacctcgacggttaccgcagcaagccggaaatcgatcgc
aacggcctgaccggttattatcgcggtcatcaggaagtgttcgaaaacgtctatgtcggt
gcaggcaaggcgcgcgccatggccgatgccggtgacgacatcgtcgccagtgcggcagcc
ggtgcatcgaaggcaagcgttaacctctcagcggccaaatcactgctctcggcagacatc
aagaaattcgtctggacggacaagaacggcgatgtggttgccgaaggcaaggaagcggtt
gccgatctttcgctcggcaagcacaagctgacgctgacggcaaccgacgccaacggcgtc
aagaccaccgataagatcgacgttctcgttcgcggcgaccgcaccctgctggttgaaaac
ttcaatgacggcaaggcggacggctgggccaccaatttcggcgcgaccgatggcaacacc
ggcaacttcctgctcaagggcacggtattttcgcgctcgagcacaacggacggccttgcc
gctccggaggcagcgctcttcgaccagagcgatgcgaccggcaacaagcttgtttatatt
ggcggacaatcggccggctggagcgactacgtcctggaagcgacgctcatccagctcgat
aatgacgcaatcggcgtctacttctattacaaggacgcgaacaactactaccgcttctcg
atggacggagaaacgaaccgccgccagctgatcaaggtttcgggcggcaatgaagttctg
ctcgcttcggtcaatgagggcgttcagtataatatggagcttccgctgaccgtctcggtc
gtcggcggcgtcatcaacgtcttcctgggtgacaagaatgtctttagcggccccgtcgtg
gatgcgacgtcgccgctctccagcggcacggttggcgtctattccagcggtcagcgcgcc
tcggttttcgatgacatcgtcgtcacgcgcgcggtcacgaccgccaaggccgggatcgac
cagcgggtctacgacctggatggcgatggcaaggcttccgtcacgctcgatgcatccggc
tcctttggccctgagcatctgactggcttcgtctggacggacctcgacggcaatgtcgtc
gccacaggcaaaaaggtcgacgtcgcgctcgataccggcatcaacaggctgatcctgaag
gtcacctccgccaacggtgccgtttcgaccgatcgcgttgatgttacggtcgtggagaag
gcgaaaattctcgttgccgaggatttctcctccgctgaggccatggcgcgcttcaagatt
gttgacgagggtgagttcggcggtatcggaccggatggaaagtcctctgagtggctgatt
tccaacggcaggctggttcagacaaccgagcttgcaagccgtgagctgacctggagcggc
gcaaccaactccgactactggaagcgtggctggagcccgatgggggacggcgtcaacgtg
ctgcgccttggcacttatgcgctcttcaacgacccggcagcgctggcatggaccgactac
gccatcgaaacaacgttccagacacctgacaaggacggtctcggcttcctgttccgctac
aaggacagcaaaaactattacaagctcgaactggatgccgacggcattcttgatcgtacc
ccgagcaatggcgccggcagcatcttcaatctcgtccggatgcgaaacggcatcgaggaa
atcctcgctcaggtgccgggcaaatatgagcctggccaggatacgaagctgcgcgtcgag
gtcatcggcgacaagatcaccgctttcctcaacgaagaggcgctgtttgcctatccgatc
ggcgatcgcgaactcgacgcgggtactttcggcctctattcctggggtaataagggtctg
gccttcgacaatctgacggtggtcaatctgaaatccggcctcgaggcgggcacaaccatc
aacggcacggaagcgcgcgacaccctcgtgggtacagatgccgatgaaacgatcttcggc
cacgggggcgatgaccggttgatcggcaacgccggcaacgaccgcctagccggcggcgat
ggcaacgacgtgctgatgggcggggcagggcgtgacgcgctgtccggcggcaacggtgac
gacgtgctgtttggcaatgagggcaacgatatcgtctccggcggtctgggtgacgacgtc
atcgaaggcggtaccggcaacgatctgctgctgggcggtgatggctccgacacctatgtc
tatggccgcggtgacggctccgacgacatcgtcgagaccgctggcgcaacgggcgacaag
gacattctcgttctgcacgatattgccagaaacgaagccgtcctgcacaagttcggcgac
aacgtcgaaatcgaattcggcaacggtgaaaaaatctcgctgcgcaaccagctcgctggc
ggcggtgtggaactggtgaccttcgccgacggaacgcttctcaaccgcgatgcgatcgtc
aagggtcttgtcaaccgtggcccggttgctgctgccgatacgctggctgcagtcgatgaa
gatgcggcatccttccttatttccttcgccacattgctggcgaatgacaaggacgccgat
ctcgaccagctggcggtgacgggtgtctcccttgtcgcgggtggaacagcggttctggag
gaaaacggcatccgcttcaccacggctgccgatttcaacggcacggcgtccttcagctac
aggatcactgacggtcgcggcggttcgagcgaggcgacggcaagcttcaccgtcaagcct
gtcaatgacgcacctgttgccgcctccatcgccgtcaaaacggaagaggatgttgtcctg
aagggcaaggtcgttgcatccgatatcgatggcgatacgctgaccttcgccatcaaggcc
gatgccggcgcggcgaagggcgaagtcaagatcgacgcggcgaccggtgagtgggtctat
gcgccgaacgccaatgtgaatggaaccgacagcttcacggttgtcgtttccgatggcaag
ggcggcagtgccgagagcgttgtctccgtcacgatcaatcccgtcaacgatgcgcctgtg
gccgtagacgacaggatcaccgtatcggaaaaggatagcgccagcttcgatctggtcgcc
aatgatacggatgtggaaggtgaccgcctgacgctcatcagcgtcgcagttgcaggcgtc
gcgggccttgccctgaccagcgaacaggcagctgctgccttctccgtggtcgatggcaag
ctggttgtcgatccttcctctgcctttgcggccctggaagatgaccagcaggcggtcgtg
acgctcacctatacggtccgcgacgccagtggcggcgaagcgcacggcacgacaaccgtg
actgtggacggctacaccgaatacaccatcgtcagcggtactgacggtaacgacgtcctg
gtggctggcgatggcaaggacatgctggaaggtggtgacggcaacgacacgctgctggcc
ggtgccggcaacgacatggtggatgcgggcgccggcaacgaccgtgtggttgctggtgac
ggcaacgatatcgtcgagggcggcgccggtaacgacgtgctgatgggcggcgccggcaat
gatgttcttcacggcggtgctggcaacgaccagctgaacggcggatcgggcgatgacacg
ctgatcggcggggcgggcaacgatgtgctgaccggtggcagtggtgcggataccttcgtt
ttcgcggccggcagcggccgggatgtggtgacggacttccaggccggcgctgacggcaag
gatgtcgtcgaactctcgaaggacgtctttgcggattaccaggcgtttatcgcctccggg
gtcttcacggatggcgaccacggtgccgagatcgccttcaaggacgggtcgacgattacc
ttcgatggtgtgaagaccgagcaattcgtcatcgacgacttccgcttcgcgtaa
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