Rhizobium sp. S41: BA939_25365
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Entry
BA939_25365 CDS
T05451
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rhv
Rhizobium sp. S41
Pathway
rhv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BA939_25365
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhv02000
]
BA939_25365
Transporters [BR:
rhv02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
BA939_25365
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
SBP_bac_6
TcdA1_RBD_3
LPAM_1
Motif
Other DBs
NCBI-ProteinID:
ANV27179
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All DBs
Position
2:2262851..2263873
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AA seq
340 aa
AA seq
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MKKIILASGAALMLTMGAAEAQDKTLTISVYAFAQDEFKELVYTPFEQKCGCKLVVETGN
SVERLAKMEANKASPVVDLAIVSMADALSATRKDLIQKIDASRVPNIEKLYDIAKDPNGD
GMSVGVNFYATSIVYRTDKMKIDSWADLLKDGIVDHVAFPNVTTNQGPPALYMLGKAIGK
DTPDLAGAIEAVGEKKDDIVTFYVKSSQLVQLMQQEEIWAAPIGRFSWAPFTKLDLPLAW
ATPKEGQTGGMNVLVVPKGTKNEDLALQFMDFWLSTDVQKALAEKLVDSPTNREVKVSDE
VANNITYGDETARSLQLIPSDVTLDNRDKWLSEWNAKVGQ
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagatcattctcgcatcgggcgccgccctgatgctgacgatgggagccgctgag
gcccaggacaagacgttgacgatctcggtctacgccttcgcgcaggatgaattcaaggaa
ctggtctatacgcccttcgagcagaaatgcggctgcaagctcgtcgtcgagaccggcaac
agcgtcgagcgtctggccaagatggaggccaacaaggccagcccggtcgtcgatctcgcc
atcgtctccatggccgatgcgctgtcggccacccgcaaggacctgatccagaagatcgat
gcttccagggttccaaatattgaaaagctctatgacatcgccaaggacccgaatggcgat
ggcatgagcgtcggcgtcaatttctacgccacgtcgattgtctaccgcaccgacaagatg
aagatcgacagctgggccgatcttttgaaggacggtatcgtcgaccacgtcgccttcccg
aatgtcaccaccaaccagggcccgccggcgctttacatgctgggcaaggccatcggcaag
gacacgcccgatcttgccggcgccatcgaggccgtgggcgaaaagaaggacgatatcgtc
accttctacgtcaagtcctcgcagctggtgcagctcatgcagcaggaggaaatctgggca
gcgccgatcggccgcttctcctgggcgcctttcaccaagctcgacctgccgctcgcctgg
gcaacgcccaaggaaggccagaccggcggcatgaacgtgctcgtcgtaccgaagggcacg
aagaacgaggaccttgcgctgcaattcatggatttctggctctcgaccgacgtccagaag
gcgctggcggaaaagctggtggacagcccgaccaacagggaagtcaaggtttccgacgag
gtggcgaacaacatcacctatggcgatgaaaccgcccgcagcctgcagctcattccttcc
gacgtaacgctcgataaccgcgacaagtggctgtcggagtggaacgccaaggtggggcag
taa
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