Rhizobium sp. S41: BA939_25945
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Entry
BA939_25945 CDS
T05451
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
rhv
Rhizobium sp. S41
Pathway
rhv00362
Benzoate degradation
rhv01100
Metabolic pathways
rhv01120
Microbial metabolism in diverse environments
rhv01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
rhv00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
BA939_25945
00624 Polycyclic aromatic hydrocarbon degradation
BA939_25945
Enzymes [BR:
rhv01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
BA939_25945
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
SdrD_B
NOMO1-like_2nd
Motif
Other DBs
NCBI-ProteinID:
ANV27285
LinkDB
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Position
2:complement(2390490..2391230)
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AA seq
246 aa
AA seq
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MSNQPPETGPFFARNRDIHPLAYAPGYKTSILRSPQRALISLEGTKSEITGPVFGHGMLN
PLDNDLILNYARPGEMPVGPRILVHGRVLDERGRGVGGALVEFWQANAGGRYRHKKESYL
AAIDPNFGGVGRTITDENGYYWFKTIQPGAYPWPNGVNDWRPAHIHFSIFGHGFAQRLIT
QMYFEGDPLIWKCPIVKTIPDEDAIRRLIAPLDMNATLPMDMLAYKFDIVLRGRRSTLFE
NRMEGN
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaccagccaccagaaaccgggcctttcttcgcgcgcaaccgcgatattcacccg
ctggcctatgcgcccggctacaagacctcgatcctgcgctcgccgcaacgcgccctgatt
tcgcttgagggaaccaagagcgagatcaccggtcccgtttttggccatggcatgctgaat
ccgctggataacgatctcatcctgaactatgcccgccccggtgaaatgcctgttggaccg
cgtattctcgttcatggccgggtgctggacgagcgcggtcgcggcgtcggcggcgcgctg
gtggaattctggcaggccaatgccggcggtcgctaccgccacaagaaggaaagctacctc
gccgccatcgatccgaatttcggcggcgtcggccgcacgatcaccgacgagaacggctat
tactggttcaagaccatccagccgggcgcctatccctggccgaacggcgtcaatgactgg
cggccggcccatatccatttctccatcttcggtcacggtttcgcgcagcgcctcatcacc
cagatgtatttcgaaggcgatccgctgatctggaaatgtccgatcgtcaaaaccattccg
gacgaggatgcgatacggaggctgatcgcgccgctggacatgaatgcgacgctgccgatg
gacatgctggcctataagttcgatatcgtgctgcgcggtcgccgctccacccttttcgaa
aaccgcatggagggcaactga
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