Rhizobium sp. S41: BA939_25945
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Entry
BA939_25945 CDS
T05451
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
rhv
Rhizobium sp. S41
Pathway
rhv00362
Benzoate degradation
rhv00624
Polycyclic aromatic hydrocarbon degradation
rhv01100
Metabolic pathways
rhv01120
Microbial metabolism in diverse environments
rhv01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
rhv00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
BA939_25945
00624 Polycyclic aromatic hydrocarbon degradation
BA939_25945
Enzymes [BR:
rhv01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
BA939_25945
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
ANV27285
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Position
2:complement(2390490..2391230)
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AA seq
246 aa
AA seq
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MSNQPPETGPFFARNRDIHPLAYAPGYKTSILRSPQRALISLEGTKSEITGPVFGHGMLN
PLDNDLILNYARPGEMPVGPRILVHGRVLDERGRGVGGALVEFWQANAGGRYRHKKESYL
AAIDPNFGGVGRTITDENGYYWFKTIQPGAYPWPNGVNDWRPAHIHFSIFGHGFAQRLIT
QMYFEGDPLIWKCPIVKTIPDEDAIRRLIAPLDMNATLPMDMLAYKFDIVLRGRRSTLFE
NRMEGN
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaccagccaccagaaaccgggcctttcttcgcgcgcaaccgcgatattcacccg
ctggcctatgcgcccggctacaagacctcgatcctgcgctcgccgcaacgcgccctgatt
tcgcttgagggaaccaagagcgagatcaccggtcccgtttttggccatggcatgctgaat
ccgctggataacgatctcatcctgaactatgcccgccccggtgaaatgcctgttggaccg
cgtattctcgttcatggccgggtgctggacgagcgcggtcgcggcgtcggcggcgcgctg
gtggaattctggcaggccaatgccggcggtcgctaccgccacaagaaggaaagctacctc
gccgccatcgatccgaatttcggcggcgtcggccgcacgatcaccgacgagaacggctat
tactggttcaagaccatccagccgggcgcctatccctggccgaacggcgtcaatgactgg
cggccggcccatatccatttctccatcttcggtcacggtttcgcgcagcgcctcatcacc
cagatgtatttcgaaggcgatccgctgatctggaaatgtccgatcgtcaaaaccattccg
gacgaggatgcgatacggaggctgatcgcgccgctggacatgaatgcgacgctgccgatg
gacatgctggcctataagttcgatatcgtgctgcgcggtcgccgctccacccttttcgaa
aaccgcatggagggcaactga
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