Rhodococcus sp. WMMA185: BFN03_01470
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Entry
BFN03_01470 CDS
T04814
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhw
Rhodococcus sp. WMMA185
Pathway
rhw03420
Nucleotide excision repair
rhw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BFN03_01470
03430 Mismatch repair
BFN03_01470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhw03400
]
BFN03_01470
Enzymes [BR:
rhw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BFN03_01470
DNA repair and recombination proteins [BR:
rhw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BFN03_01470
MMR (mismatch excision repair)
Other MMR factors
BFN03_01470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_22
DEAD
ResIII
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AOW91809
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All DBs
Position
361554..364007
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AA seq
817 aa
AA seq
DB search
MNTISGTASSTGAASSPHAAGPAAGGSDALLQGLNPPQRDAVMHSGSPLLIVAGAGSGKT
AVLTRRIAYLLAERGVMPGQILAITFTNKAAAEMRERVAQLVGPRANSMWVSTFHSSCVR
ILRAQATLLPGLNSNFSIYDADDSRRLLTMIAKELNIDTKRYSARLLATHISNLKNELVG
PEQAAAEADKDPADLPRLIAKVYSHYQQRLRSANALDFDDLIGETVAMLQAFPQVAEYYR
RRFRHVLVDEYQDTNHAQYVLVRELVGGGEDPEEGVAPAELCVVGDADQSIYAFRGATIR
NIEEFERDYPDARTILLEQNYRSSQNILSAANSVISKNTGRREKRLWTDSGEGELITGYV
ADNEHDEASFVASEIDKLVDSGAFKFSDVAVFYRTNNSSRAMEEIFIRLGVPYKVVGGVR
FYERKEVRDVIAYLRVLANETDTVSLRRILNTPRRGIGDRAEACVAVHAEQRGISFAEAL
RDGGEGRVPLLNTRSQKAIASFLELMDGLRALLPPETAADEVVPDQLGDIGDVVEAVLER
TGYHAELAASSDPQDGARLDNLNELASVAREFSSDARNAAGLVEPLEEGEIEAREGEPAP
GSLAAFLERVSLVADSDQLPDSDEGVVTLMTLHTAKGLEFPVVFVTGWEDGQFPHMRALG
DPTELSEERRLAYVGITRARHRLYLTRAVMRSAWGQPVQNPESRFLQEIPSDLVHWRRED
PGTGAGGAIGGVRTRGSSSGVQGSSGGSATSSSFGAARSRNNNLVLAVGDRVSHDKYGLG
TVLETKGAGPTATVTVDFGSAGKVRLMLIGGVPMVKL
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgaacactatctccggaaccgcttcttccacgggcgcggcgtcgtctccgcatgccgcc
gggcctgcagctgggggatcagatgcgctccttcagggcctcaatccaccgcagcgagat
gcggtcatgcactcagggtctccgctgctgatcgttgcgggtgcgggctcggggaagacg
gctgtgctcacccggcgcattgcgtatctgctggccgagcggggggtcatgcccggtcag
atcctggctatcaccttcacgaacaaggcggccgcggagatgcgggagcgagtcgcccag
ctcgtcggtccccgggccaacagcatgtgggtgtcgaccttccattcgagctgcgtacgc
atcttgcgggcgcaggccacgctcctgcccggcctcaattcgaatttctcgatttacgac
gcggacgactcgcggcggttgctgacgatgatcgccaaggaactgaacatcgataccaag
cggtattccgcgcggcttctcgccacccacatctcgaatctgaagaatgaactcgtcgga
cctgagcaagcggcggccgaagcggacaaggacccggccgacttgccacggctgatcgcc
aaggtctacagccactatcagcagcggttgcgttcggcgaacgcgctggacttcgacgat
ctgatcggcgagacggttgcgatgttgcaggcgtttccgcaggttgccgagtactaccgg
cgccggttccgtcacgtgctggtcgatgagtaccaggacacgaaccacgcccagtatgtg
ctcgtgcgcgagctggtcgggggcggagaagaccctgaagagggggttgcgcccgccgag
ttgtgcgtggtgggcgatgcagatcagtcgatctacgctttccgtggcgccacgatccgc
aacatcgaggagttcgaacgggactacccggatgcgcgcaccattttgctggagcagaac
taccgttcgagccagaacatcctgtcggccgcgaactccgtgatctcgaagaacacaggt
cgtcgcgaaaagcggttatggaccgattcaggcgagggtgaactcataacgggttacgtg
gccgacaacgaacacgacgaggcgtcgttcgtagcctcggagatcgacaagctggtcgat
tccggtgctttcaagttctctgacgttgcggtgttctatcgcacaaacaactcttcccgc
gccatggaagagatcttcatccgactcggcgtgccgtacaaggtggtcggcggggtgcgg
ttctacgaacgcaaggaggtgcgcgacgtaatcgcatatctccgagtcctcgcgaacgag
accgatacggtcagcctgcgccgcatcctcaacacaccccggcgcggcatcggtgatcgt
gccgaggcctgcgtagccgtccacgccgagcaacggggcatcagttttgccgaggcgttg
cgggacggtggggagggccgggtgccgctgctgaatacgcgttctcagaaggccattgca
tccttcctcgaactcatggacgggctgcgtgcgcttcttccaccggagaccgccgcggac
gaagttgttcccgatcagctcggagacatcggtgatgtcgtcgaggccgttctcgaacgc
acgggctaccatgccgaactcgcggcgagtagcgatcctcaggacggagcccgcctcgac
aacctcaacgaacttgccagcgttgcccgggagttcagttccgatgccaggaatgccgca
ggactcgtcgaaccgctagaggaaggcgagatcgaagcgcgggagggcgaacccgccccc
ggctcgcttgcggcctttttggagcgggtctctctcgttgcggattccgatcagctaccg
gacagcgacgaaggcgtcgttacgctgatgacgttgcatactgcgaagggcctcgagttc
ccggtcgttttcgtcaccggctgggaggacggtcaatttccgcatatgcgggcactcggt
gaccccaccgaactgtccgaggagcgcaggctcgcatatgtaggcatcactcgtgcccgc
caccggttgtatttgactcgggccgtcatgcgttcggcgtggggacagcctgtccagaac
ccggagtcaaggtttttgcaggagatcccatccgatctcgtgcactggcgcagggaggac
ccaggaaccggtgcgggtggcgcgattggtggtgtgcgcacgcgcggatcgagttccggc
gttcagggctcgagtgggggttcggccaccagttcgagttttggggccgcccggtcccgc
aacaacaacctggtgctcgcggtcggcgatcgggtcagtcacgacaagtacggcctcggc
accgttctcgagaccaaaggcgcagggccgacggcgacggtcaccgtcgacttcggcagc
gccggcaaggtgcggttgatgctgatcggcggcgtgccgatggtgaaactgtag
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