KEGG   Rhodococcus sp. WMMA185: BFN03_06590
Entry
BFN03_06590       CDS       T04814                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
rhw  Rhodococcus sp. WMMA185
Brite
KEGG Orthology (KO) [BR:rhw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rhw03016]
    BFN03_06590
Enzymes [BR:rhw01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     BFN03_06590
Transfer RNA biogenesis [BR:rhw03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    BFN03_06590
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC Lipase_GDSL_2
Other DBs
NCBI-ProteinID: AOW92482
UniProt: A0A1D8T480
LinkDB
Position
complement(1460472..1461758)
AA seq 428 aa
MPELPDQTAPHVPGGEPDRPLVPLLAPRDGVPEVVATAEAVAKAAAALNQGSGPLAVDAE
RASGFRYSARAYLVQLRREGAGTVLLDPIPCATDLAPLAEVINPLEWILHAADQDLPGLA
ELGLAPASLFDTELAGRLAGFERVGLAAMVDQVLGFELRKGHGAADWSKRPLPESWLNYA
ALDVELLVELRNEMAAELDKQGKSEWAVQEFERIRLAGPPEPKPDRWRRTSRITSLETQR
QLAAARSLWQAREELARKRDVSPGRVLPDSAIIEAAGTDPRSIEALRALPVFGGPRQRRY
SRIWLQALEHARALPEAELPPKNPPSTGPPPASRWARNDPAAADRLTTVREALAALAAEV
AVPVENLVTPELVRRLCWDWTAPENGDFEAVIEQVLEAGRARPWQRRLTVPVLGEALASA
ERKRAEDS
NT seq 1287 nt   +upstreamnt  +downstreamnt
atgcccgaactccccgaccagaccgcgccgcacgttccgggtggagaaccggatcgtccg
ctcgtacctttgctcgcaccgagggacggcgtgccggaggtggtggccaccgccgaggca
gtcgccaaagccgctgccgccctgaaccagggcagcggccctctggctgtcgacgcggaa
cgcgcatcgggtttccggtactcagcgcgggcgtatctggtgcaactgcggcgcgagggt
gccgggacggttctgctcgacccgatcccttgcgccacagatcttgccccgctggccgag
gtgatcaacccgttggaatggatcctgcacgccgcggaccaggatctgccggggcttgcg
gaattggggctggcgccggcgtccctgttcgacaccgaacttgccggacgcctggccggt
ttcgaacgggtcggcctcgccgcgatggtcgatcaagtactgggcttcgaactacgcaag
ggacacggcgccgccgactggtcgaagcgtccgctgcccgaatcatggctcaactacgcc
gcactcgacgtcgaattgctcgtcgaactccgcaacgagatggccgccgaactcgacaag
cagggcaagagcgaatgggcggtgcaggaattcgagcgcattcgactcgccggacctccg
gaacccaaacccgaccggtggcgccgcacctcgcgcatcacctcgctcgagacacagcgt
caactcgccgccgctcgctcgttatggcaggcgcgagaggaactcgcccgcaaacgtgac
gtctcccccggtcgggtcctgccggattcggcaatcatcgaagcggcgggcaccgatccc
cgaagcatcgaggcactgcgggccctacccgtgttcggtggaccccgccaacggcgatac
tcccgcatctggctgcaggcgctcgagcacgcccgggcgttgcctgaggcggaactccca
cccaagaacccaccctccacgggtccgccgcccgcaagtcgctgggcacgaaacgaccct
gccgcagccgaccgactgactacggtgcgcgaagccctcgcggccctcgccgccgaggtc
gcggtccctgtggagaacttggtcacacccgaactcgttcgacggctctgctgggactgg
acggcgcccgagaacggtgacttcgaggccgtgatcgagcaggttctcgaggccggtcgg
gcccgaccgtggcagcgccggctgacagtgcccgtgctgggcgaagcgctcgcctcggcc
gaacggaaaagagccgaagacagctag

DBGET integrated database retrieval system