Rhodococcus sp. WMMA185: BFN03_06590
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Entry
BFN03_06590 CDS
T04814
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rhw
Rhodococcus sp. WMMA185
Brite
KEGG Orthology (KO) [BR:
rhw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhw03016
]
BFN03_06590
Enzymes [BR:
rhw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BFN03_06590
Transfer RNA biogenesis [BR:
rhw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BFN03_06590
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Lipase_GDSL_2
Motif
Other DBs
NCBI-ProteinID:
AOW92482
UniProt:
A0A1D8T480
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Position
complement(1460472..1461758)
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AA seq
428 aa
AA seq
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MPELPDQTAPHVPGGEPDRPLVPLLAPRDGVPEVVATAEAVAKAAAALNQGSGPLAVDAE
RASGFRYSARAYLVQLRREGAGTVLLDPIPCATDLAPLAEVINPLEWILHAADQDLPGLA
ELGLAPASLFDTELAGRLAGFERVGLAAMVDQVLGFELRKGHGAADWSKRPLPESWLNYA
ALDVELLVELRNEMAAELDKQGKSEWAVQEFERIRLAGPPEPKPDRWRRTSRITSLETQR
QLAAARSLWQAREELARKRDVSPGRVLPDSAIIEAAGTDPRSIEALRALPVFGGPRQRRY
SRIWLQALEHARALPEAELPPKNPPSTGPPPASRWARNDPAAADRLTTVREALAALAAEV
AVPVENLVTPELVRRLCWDWTAPENGDFEAVIEQVLEAGRARPWQRRLTVPVLGEALASA
ERKRAEDS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactccccgaccagaccgcgccgcacgttccgggtggagaaccggatcgtccg
ctcgtacctttgctcgcaccgagggacggcgtgccggaggtggtggccaccgccgaggca
gtcgccaaagccgctgccgccctgaaccagggcagcggccctctggctgtcgacgcggaa
cgcgcatcgggtttccggtactcagcgcgggcgtatctggtgcaactgcggcgcgagggt
gccgggacggttctgctcgacccgatcccttgcgccacagatcttgccccgctggccgag
gtgatcaacccgttggaatggatcctgcacgccgcggaccaggatctgccggggcttgcg
gaattggggctggcgccggcgtccctgttcgacaccgaacttgccggacgcctggccggt
ttcgaacgggtcggcctcgccgcgatggtcgatcaagtactgggcttcgaactacgcaag
ggacacggcgccgccgactggtcgaagcgtccgctgcccgaatcatggctcaactacgcc
gcactcgacgtcgaattgctcgtcgaactccgcaacgagatggccgccgaactcgacaag
cagggcaagagcgaatgggcggtgcaggaattcgagcgcattcgactcgccggacctccg
gaacccaaacccgaccggtggcgccgcacctcgcgcatcacctcgctcgagacacagcgt
caactcgccgccgctcgctcgttatggcaggcgcgagaggaactcgcccgcaaacgtgac
gtctcccccggtcgggtcctgccggattcggcaatcatcgaagcggcgggcaccgatccc
cgaagcatcgaggcactgcgggccctacccgtgttcggtggaccccgccaacggcgatac
tcccgcatctggctgcaggcgctcgagcacgcccgggcgttgcctgaggcggaactccca
cccaagaacccaccctccacgggtccgccgcccgcaagtcgctgggcacgaaacgaccct
gccgcagccgaccgactgactacggtgcgcgaagccctcgcggccctcgccgccgaggtc
gcggtccctgtggagaacttggtcacacccgaactcgttcgacggctctgctgggactgg
acggcgcccgagaacggtgacttcgaggccgtgatcgagcaggttctcgaggccggtcgg
gcccgaccgtggcagcgccggctgacagtgcccgtgctgggcgaagcgctcgcctcggcc
gaacggaaaagagccgaagacagctag
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