Rhodococcus sp. WMMA185: BFN03_09060
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Entry
BFN03_09060 CDS
T04814
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rhw
Rhodococcus sp. WMMA185
Pathway
rhw03030
DNA replication
rhw03410
Base excision repair
rhw03420
Nucleotide excision repair
rhw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BFN03_09060
03410 Base excision repair
BFN03_09060
03420 Nucleotide excision repair
BFN03_09060
03440 Homologous recombination
BFN03_09060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhw03032
]
BFN03_09060
03400 DNA repair and recombination proteins [BR:
rhw03400
]
BFN03_09060
Enzymes [BR:
rhw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BFN03_09060
DNA replication proteins [BR:
rhw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BFN03_09060
DNA repair and recombination proteins [BR:
rhw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BFN03_09060
NER (nucleotide excision repair)
GGR (global genome repair) factors
BFN03_09060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
AOW92781
UniProt:
A0A1D8T509
LinkDB
All DBs
Position
complement(2047964..2050627)
Genome browser
AA seq
887 aa
AA seq
DB search
MLLDGHSLAFRAFYALPAENFKTHSGQVTNAVYGFTSMLINLLRDEQPTHVAAAFDVSRQ
TFRAEKFPEYKANRSKAPDEFKGQVEITKDVLGALGIPVMAEEGFEADDIIATLTTQAEA
LGYRVLVVTGDRDSLQLVTDGVTVLYPKKGVSELARFTPAAVEEKYGLTPAQYPDFAALR
GDPSDNLPGIPGVGEKTATKWIKEYGDLVGLVDNVDKVRGKVGDALRENLPNVLLNRELT
EMVRDVPLPYTPDQLILAQWDRDKIHALFDDLEFKVLRDRLFATLAPVEAEAEEGFEVRG
GALESGAVADWLSEHTSGGERSGVSVVGTRRPYGADVTAIAIASADGEGAYIDTARVTPE
DEKALGDWLADADQPKALHEAKWAMHALRGRGWVLGGLTSDTALAAYLVRPGQRTFNLDD
LALRYLRRELRAEKTGEEQLSLLDDADQVEAEAAETEILSARAVLDLASALDAELSDIES
STLLSEIELPLLEVLADLEASGIAVDGSHLQDLQSQFAARVSDAAEAAYGVIGKQINLGS
PKQLQVVLFEELEMPKTKKTKTGYTTDADALQNLFEKTSHPFLEHLLAHRDATRLKVTVD
GLLKTVAEDGRIHTTFNQTVAATGRLSSTEPNLQNIPVRTDAGRQIRDGFVVGEGFDTLL
TADYSQIEMRIMAHVSGDEGLIEAFNTGEDLHSFVGARAFGVPIEEVTPELRRRVKAMSY
GLAYGLSAFGLAAQLKISTEEAKSQMEAYFARFGGVRDYLREVVEQARKDGFTSTLYGRR
RYLPDLNSDNRQRREVAERAALNAPIQGTAADIIKVAMINVARSLREAGLRSRMLLQVHD
ELVLEVALSEREQVEQLVRHEMSSAIELSVPLEVSVGTGRSWDAAAH
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgcttctcgacggtcattcgctggccttccgcgcgttctacgcactgccggcagaaaac
ttcaagacccacagcggtcaggtcaccaacgcggtctacgggttcacgtcgatgttgatc
aacctgctgcgcgacgaacagcccacccatgtcgcggccgcgttcgacgtgtcaaggcaa
accttccgggcggagaagttccccgaatacaaggcgaatcgcagcaaggcgccggacgag
ttcaaaggccaggtggagatcaccaaggacgttctcggcgcgctcggcatccctgtcatg
gcggaagaaggcttcgaggctgacgacatcatcgcgacactgaccacccaggcggaggcg
ctcgggtaccgcgttctcgtggtgaccggtgaccgggactcgctccagttggtcaccgat
ggggtgacggtgctgtacccgaagaagggtgtttcggagctggcccggttcacccccgcg
gcggtggaggagaaatacgggctcaccccagcgcagtacccggacttcgcggcgcttcgg
ggcgacccgagcgacaacttgccgggcatcccgggcgtgggggagaagaccgccaccaag
tggatcaaggaatacggcgacctcgtcggactcgtcgacaacgtcgacaaagtgcgtggc
aaggtcggtgacgcactgcgcgagaatcttccgaacgttcttctcaatcgggaactcacc
gagatggtgcgcgatgttccacttccgtacacaccggaccaactcattctcgcgcagtgg
gatcgtgacaagatccacgcactgttcgacgacctcgagttcaaggtgttgcgagaccgg
ttgttcgcgacgctcgcacccgtcgaggccgaagccgaggagggcttcgaggtgcgtggt
ggtgcgctcgaatccggtgcggtcgctgactggctgtccgagcacacgtcgggcggcgaa
agatccggagtctccgtggtcggaacccgcagaccttacggcgccgacgtgacggcgatc
gcgattgcgtccgcggacggcgaaggcgcctacatcgacaccgcaagggttacacccgaa
gacgagaaggcgctcggcgactggctcgctgatgcggatcagccgaaagccctgcacgaa
gccaagtgggcgatgcacgctctgcgcggccgcggctgggtgctcggcggtctcaccagc
gacaccgcgctggcggcctacctggtacggccggggcagcggacgttcaacctcgacgac
ctggcgctgcgctacctgcgccgagagctgcgggcggagaagacgggcgaggagcaattg
tcgcttctcgacgacgccgatcaggtggaggccgaggcagcggaaaccgaaatcctcagc
gcccgtgccgtgcttgatctcgcatcggcgctcgatgccgaactttccgacatcgaatcg
agcaccctgctctccgagatcgagttgcctctgttggaggtgctcgccgatctcgaagca
tcgggtatcgccgtcgacggttctcacctgcaagatctgcagagccagttcgccgccagg
gtctcggacgcggcggaggctgcctacggggtcatcgggaagcagatcaatctcgggtca
cccaaacagctgcaagtcgtgctcttcgaagaactggagatgcccaagacgaagaagacc
aagaccggctacaccaccgacgccgatgcgctgcagaacttgttcgagaagacgtctcac
ccgttcctcgagcacctgctcgcccaccgtgacgcgacacgtctgaaggtgacggtggac
ggtctgctcaagaccgttgcggaggatggtcgcatacataccacgttcaaccagacggtc
gctgccaccggccggctgtcttcgaccgaacccaatctccagaacatcccggtccgcacc
gacgcgggtcgtcagatccgtgacgggttcgtagtcggcgaaggcttcgacaccctgctc
accgcggactacagccagatcgagatgcggatcatggcccacgtgtccggggacgagggg
ctgatcgaggcgttcaacaccggcgaggacctgcacagcttcgtaggcgcccgcgcgttc
ggcgtgccgatcgaggaggtcacgcccgagctgcgccgccgggtgaaggcgatgtcctac
ggtcttgcctatgggctcagcgccttcgggctcgctgcacagctcaagatctcgaccgaa
gaggccaagtctcagatggaggcttactttgcgcggttcggtggcgttcgcgactacttg
cgcgaggtggtggaacaggcacggaaggacggtttcacctcgacgctgtacggccgccgt
cgctacctgcccgatctcaacagcgacaaccgccagcgtcgagaagtcgcggagcgggcc
gcgttgaatgccccgatccagggcacggccgccgacatcatcaaggtcgcgatgatcaac
gttgcacgctcgctgcgcgaagccgggctgaggtcacgcatgctgctgcaagttcacgac
gagctcgtcctcgaggtcgccctgtcggagcgtgaacaggttgaacagctggtgcggcac
gagatgtcctcggccatcgagctgtcggtgcctctcgaggtgtccgtcggcaccggtcgc
agctgggacgccgccgcacactag
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