KEGG   Rhodococcus sp. WMMA185: BFN03_09060
Entry
BFN03_09060       CDS       T04814                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
rhw  Rhodococcus sp. WMMA185
Pathway
rhw03030  DNA replication
rhw03410  Base excision repair
rhw03420  Nucleotide excision repair
rhw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rhw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BFN03_09060
   03410 Base excision repair
    BFN03_09060
   03420 Nucleotide excision repair
    BFN03_09060
   03440 Homologous recombination
    BFN03_09060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rhw03032]
    BFN03_09060
   03400 DNA repair and recombination proteins [BR:rhw03400]
    BFN03_09060
Enzymes [BR:rhw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BFN03_09060
DNA replication proteins [BR:rhw03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BFN03_09060
DNA repair and recombination proteins [BR:rhw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     BFN03_09060
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BFN03_09060
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 DNA_pol_A_exo1 HHH_5 DNA_pol_lambd_f
Other DBs
NCBI-ProteinID: AOW92781
UniProt: A0A1D8T509
LinkDB
Position
complement(2047964..2050627)
AA seq 887 aa
MLLDGHSLAFRAFYALPAENFKTHSGQVTNAVYGFTSMLINLLRDEQPTHVAAAFDVSRQ
TFRAEKFPEYKANRSKAPDEFKGQVEITKDVLGALGIPVMAEEGFEADDIIATLTTQAEA
LGYRVLVVTGDRDSLQLVTDGVTVLYPKKGVSELARFTPAAVEEKYGLTPAQYPDFAALR
GDPSDNLPGIPGVGEKTATKWIKEYGDLVGLVDNVDKVRGKVGDALRENLPNVLLNRELT
EMVRDVPLPYTPDQLILAQWDRDKIHALFDDLEFKVLRDRLFATLAPVEAEAEEGFEVRG
GALESGAVADWLSEHTSGGERSGVSVVGTRRPYGADVTAIAIASADGEGAYIDTARVTPE
DEKALGDWLADADQPKALHEAKWAMHALRGRGWVLGGLTSDTALAAYLVRPGQRTFNLDD
LALRYLRRELRAEKTGEEQLSLLDDADQVEAEAAETEILSARAVLDLASALDAELSDIES
STLLSEIELPLLEVLADLEASGIAVDGSHLQDLQSQFAARVSDAAEAAYGVIGKQINLGS
PKQLQVVLFEELEMPKTKKTKTGYTTDADALQNLFEKTSHPFLEHLLAHRDATRLKVTVD
GLLKTVAEDGRIHTTFNQTVAATGRLSSTEPNLQNIPVRTDAGRQIRDGFVVGEGFDTLL
TADYSQIEMRIMAHVSGDEGLIEAFNTGEDLHSFVGARAFGVPIEEVTPELRRRVKAMSY
GLAYGLSAFGLAAQLKISTEEAKSQMEAYFARFGGVRDYLREVVEQARKDGFTSTLYGRR
RYLPDLNSDNRQRREVAERAALNAPIQGTAADIIKVAMINVARSLREAGLRSRMLLQVHD
ELVLEVALSEREQVEQLVRHEMSSAIELSVPLEVSVGTGRSWDAAAH
NT seq 2664 nt   +upstreamnt  +downstreamnt
atgcttctcgacggtcattcgctggccttccgcgcgttctacgcactgccggcagaaaac
ttcaagacccacagcggtcaggtcaccaacgcggtctacgggttcacgtcgatgttgatc
aacctgctgcgcgacgaacagcccacccatgtcgcggccgcgttcgacgtgtcaaggcaa
accttccgggcggagaagttccccgaatacaaggcgaatcgcagcaaggcgccggacgag
ttcaaaggccaggtggagatcaccaaggacgttctcggcgcgctcggcatccctgtcatg
gcggaagaaggcttcgaggctgacgacatcatcgcgacactgaccacccaggcggaggcg
ctcgggtaccgcgttctcgtggtgaccggtgaccgggactcgctccagttggtcaccgat
ggggtgacggtgctgtacccgaagaagggtgtttcggagctggcccggttcacccccgcg
gcggtggaggagaaatacgggctcaccccagcgcagtacccggacttcgcggcgcttcgg
ggcgacccgagcgacaacttgccgggcatcccgggcgtgggggagaagaccgccaccaag
tggatcaaggaatacggcgacctcgtcggactcgtcgacaacgtcgacaaagtgcgtggc
aaggtcggtgacgcactgcgcgagaatcttccgaacgttcttctcaatcgggaactcacc
gagatggtgcgcgatgttccacttccgtacacaccggaccaactcattctcgcgcagtgg
gatcgtgacaagatccacgcactgttcgacgacctcgagttcaaggtgttgcgagaccgg
ttgttcgcgacgctcgcacccgtcgaggccgaagccgaggagggcttcgaggtgcgtggt
ggtgcgctcgaatccggtgcggtcgctgactggctgtccgagcacacgtcgggcggcgaa
agatccggagtctccgtggtcggaacccgcagaccttacggcgccgacgtgacggcgatc
gcgattgcgtccgcggacggcgaaggcgcctacatcgacaccgcaagggttacacccgaa
gacgagaaggcgctcggcgactggctcgctgatgcggatcagccgaaagccctgcacgaa
gccaagtgggcgatgcacgctctgcgcggccgcggctgggtgctcggcggtctcaccagc
gacaccgcgctggcggcctacctggtacggccggggcagcggacgttcaacctcgacgac
ctggcgctgcgctacctgcgccgagagctgcgggcggagaagacgggcgaggagcaattg
tcgcttctcgacgacgccgatcaggtggaggccgaggcagcggaaaccgaaatcctcagc
gcccgtgccgtgcttgatctcgcatcggcgctcgatgccgaactttccgacatcgaatcg
agcaccctgctctccgagatcgagttgcctctgttggaggtgctcgccgatctcgaagca
tcgggtatcgccgtcgacggttctcacctgcaagatctgcagagccagttcgccgccagg
gtctcggacgcggcggaggctgcctacggggtcatcgggaagcagatcaatctcgggtca
cccaaacagctgcaagtcgtgctcttcgaagaactggagatgcccaagacgaagaagacc
aagaccggctacaccaccgacgccgatgcgctgcagaacttgttcgagaagacgtctcac
ccgttcctcgagcacctgctcgcccaccgtgacgcgacacgtctgaaggtgacggtggac
ggtctgctcaagaccgttgcggaggatggtcgcatacataccacgttcaaccagacggtc
gctgccaccggccggctgtcttcgaccgaacccaatctccagaacatcccggtccgcacc
gacgcgggtcgtcagatccgtgacgggttcgtagtcggcgaaggcttcgacaccctgctc
accgcggactacagccagatcgagatgcggatcatggcccacgtgtccggggacgagggg
ctgatcgaggcgttcaacaccggcgaggacctgcacagcttcgtaggcgcccgcgcgttc
ggcgtgccgatcgaggaggtcacgcccgagctgcgccgccgggtgaaggcgatgtcctac
ggtcttgcctatgggctcagcgccttcgggctcgctgcacagctcaagatctcgaccgaa
gaggccaagtctcagatggaggcttactttgcgcggttcggtggcgttcgcgactacttg
cgcgaggtggtggaacaggcacggaaggacggtttcacctcgacgctgtacggccgccgt
cgctacctgcccgatctcaacagcgacaaccgccagcgtcgagaagtcgcggagcgggcc
gcgttgaatgccccgatccagggcacggccgccgacatcatcaaggtcgcgatgatcaac
gttgcacgctcgctgcgcgaagccgggctgaggtcacgcatgctgctgcaagttcacgac
gagctcgtcctcgaggtcgccctgtcggagcgtgaacaggttgaacagctggtgcggcac
gagatgtcctcggccatcgagctgtcggtgcctctcgaggtgtccgtcggcaccggtcgc
agctgggacgccgccgcacactag

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