Rhodococcus sp. WMMA185: BFN03_13780
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Entry
BFN03_13780 CDS
T04814
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rhw
Rhodococcus sp. WMMA185
Brite
KEGG Orthology (KO) [BR:
rhw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhw03400
]
BFN03_13780
Enzymes [BR:
rhw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BFN03_13780
DNA repair and recombination proteins [BR:
rhw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BFN03_13780
Prokaryotic type
BFN03_13780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AOW94979
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Position
complement(3072645..3073952)
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AA seq
435 aa
AA seq
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MRLRDLPVLNAVAEAGARALGLFVLDERLLRPAGEARMRCLFRSLSELNERLEGRLLLVE
GDPVDVVPAVAREVSAFETHVSADFGPYGRERDAAVAERIPLVATGSPYAVAPGTVGKTN
GQPYRVFTPYFRKWLGHGWQMPARTGPETVEWLNPDEVPVRRATIPVPGPGGCTAGEVSA
LKRWAEFREDGLADYAKMRDRPDLDATSRMSVFLRFGNIHPRTMLHDLASSRDRGAEMYR
RQLAWRDFYADILFQRPDSARGNYDRRFDHIRYDSGPDAEQAFSAWCEGRTGFPIVDAGM
RQLNAEGWMHNRVRMIVASFFVKDLHLPWWRGAGYFMKHLADADLANNQHGWQWTAGSGT
DASPYFRIFNPTTQGEKFDPDGEYVRRWVPELRGVHGKAVHALPDGRPEGYPPPIVDHAH
ERQEALARYAEIKGL
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcctcagggatctgcccgtgctgaacgcagtagcggaggcgggcgcccgtgcgctc
ggcctgttcgtcctcgatgagaggctgctgaggcccgcgggtgaggcgcgcatgcgttgc
ctgttccgcagcctcagcgaactgaacgaacgactcgagggcagattgcttttggtggag
ggtgatcccgtcgatgtcgtgcccgcggtcgcgcgggaggtgtcggcattcgagactcat
gtgagcgccgatttcggcccctacggacgtgagcgtgatgcggccgtagcggagcgtatc
ccgctggttgccactggctccccgtacgcagtggcaccgggaacggtcggcaagacgaac
gggcaaccgtatcgggtgttcaccccgtacttcaggaagtggctggggcacgggtggcag
atgccggcccggaccgggcccgagaccgtcgaatggctgaacccggacgaggtgccggtc
cggcgggcgacgatccccgtacccggacccggcgggtgcaccgcaggcgaggtgtcggca
ctgaagcggtgggcggagttccgcgaagacggtctcgccgattacgcgaagatgcgggat
cggcccgacctcgatgcgacgagcaggatgtcggtctttctccgattcggcaacattcat
ccgcggacgatgcttcacgacctggcgagcagccgggataggggcgccgaaatgtaccgg
cgacagctggcgtggcgagatttctacgccgacatcctgttccaacgcccggacagcgcc
cgcggcaactacgaccgccgcttcgatcacatccgctacgacagcgggcctgacgcagag
caggcattcagcgcctggtgcgagggccgcacggggttcccgatcgtcgatgcgggaatg
cggcaactgaatgcggaagggtggatgcacaacagggtgcggatgatcgttgcgtcgttc
ttcgtgaaagatctgcatttgccgtggtggcgcggtgcaggttatttcatgaaacacctc
gctgatgcggacctggccaacaaccagcacggatggcagtggaccgcggggtcgggtact
gatgcgtcgccgtacttcaggatcttcaacccgacgactcagggggagaagttcgacccg
gacggtgagtacgtgcgtcggtgggtacccgagttgcgtggcgttcacggaaaggctgtc
cacgccttgccggacggtcggcctgagggctatccaccgccgatcgtcgaccatgcccac
gaacggcaggaggctctcgctcgctatgccgaaatcaagggcctgtga
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