Rhodococcus sp. WMMA185: BFN03_18150
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Entry
BFN03_18150 CDS
T04814
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rhw
Rhodococcus sp. WMMA185
Pathway
rhw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BFN03_18150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhw03019
]
BFN03_18150
03400 DNA repair and recombination proteins [BR:
rhw03400
]
BFN03_18150
Enzymes [BR:
rhw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BFN03_18150
Messenger RNA biogenesis [BR:
rhw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BFN03_18150
DNA repair and recombination proteins [BR:
rhw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BFN03_18150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
MarR_2
DUF3553
HTH_20
MarR
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
AOW95210
UniProt:
A0A1D8TC60
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All DBs
Position
4030578..4032239
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AA seq
553 aa
AA seq
DB search
MSTPNPNDRGLTDALDRADDLRRVAREDFGWESLKPGQLEAMTPILDGRDVVAAMPTGYG
KSAVYQVTAALREGMTLVISPLIALEHDQVSGIESADDAPIALALNSTLGPRRTAEAWRI
VEQAGAEYVFLAPEQLANETTLARLADVDISLIVVDEAHCISAWGHDFRPDYLRLGSVIE
RLGHPPVLALTATASPPVREEIVTQLRMRKPVVAVGGFDRPNIRLEVWRCTTAKDKRHTL
LARVPEVAQEGTGLLYVSTRAATLQYARWIADAGLRTAAYHGGMRGADRTHVHDGFRENR
FDVVVATSAFGLGIDKPDVRFVLHESVPDSLDDYYQQIGRAGRDGADALALLFYRPEDLA
LRTFFASSHPQYDAMRRIYRALPTEPISLRELRFRTGLRSRTVTNAVNLLARAGVIDDGD
SGIASAGVADDDAVTAALRVATTDRRMDRSRVEMMRGYAETRGCRRRFLLEYFGEHPERP
CGNCDRCDENSCAPIYLEHLPFPVDTRVTHRDWGAGVVIRAEADRITVLFDEHGYRTLSL
DALAGTGLLQALP
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaccaaaccccaatgaccgtggcctcactgatgcactcgaccgcgctgacgac
ctgcgtcgcgtcgcgcgggaggactttggctgggagtcgctcaaacctggccagctcgag
gcgatgacaccgatactcgacggccgcgacgtggtcgccgcgatgcccaccggatacggc
aagtccgcggtctatcaggtgacggcggcgctgcgcgagggcatgacactggtgatctcg
ccgctcatcgcgctcgagcacgatcaggtgtcgggcatcgagtcggccgacgacgctccg
atcgcgctggcactcaactcgacgctggggccgcgtcggactgcggaggcctggcggatc
gtcgagcaggcgggcgccgagtacgtgtttctcgcccccgagcagctcgcgaacgagacg
accctcgcgcgcctcgccgacgtcgacatctcgctgatcgtggtcgacgaggcacactgc
atcagcgcatggggccacgacttccgccccgactacctgcgactcggttcggtaatcgag
cgactcggccatcccccggtcctggcgttgactgcgaccgcgtcgccacccgtgcgggag
gagatcgtcacccaactccggatgcgtaaaccggtcgtggcggtcggcggattcgaccga
cctaacattcgactcgaggtgtggcggtgtaccaccgccaaggacaagaggcacaccttg
cttgcgcgggtgccggaggtcgcgcaggagggcaccggactgctctacgtctcgacccgt
gccgcgacgctgcaatacgcccgctggatcgccgacgcggggttgcgcaccgcggcgtat
cacggcgggatgcgcggggcggatcgcacccacgtccacgacgggtttcgggaaaaccgg
ttcgatgtcgtggtggcaacgtcggcgttcgggctcggcatcgacaagcccgacgtgcgg
ttcgtattgcacgagtcggtaccggattcgctcgacgactactaccagcagatcggacgg
gccggccgcgacggtgccgacgcgctcgcgttgctgttctaccgcccggaggatctggcc
ctgcgcacgttcttcgcctcgagtcacccccagtacgacgcaatgcgccggatctaccgt
gctctaccaaccgagccgatatcactgcgcgagttgcggttccgcacaggactacgctct
cggaccgtgaccaacgcggtcaatctactggcccgcgccggtgtcatcgatgacggggac
tccggcatcgcttccgcgggtgtcgcagacgacgacgcggtaacggcggcgctgcgcgtc
gccacgaccgaccggaggatggaccgctcccgtgtcgagatgatgcggggctacgccgaa
acccgcgggtgccgtcgccggttcctgctcgagtacttcggcgaacaccccgagcggccg
tgtgggaattgcgaccgctgtgacgaaaacagctgtgcaccaatatatttagagcattta
ccattccctgtcgatacccgagtgactcaccgggactggggtgccggcgttgtgatccgc
gccgaagctgaccggattaccgtccttttcgacgagcacggctatcgaaccctgtctctg
gatgcgctcgcgggtacgggtctgctgcaagcattgccctga
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