Rhodococcus sp. WB9: FND50_02205
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Entry
FND50_02205 CDS
T11350
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rhwb Rhodococcus sp. WB9
Pathway
rhwb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhwb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FND50_02205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhwb03400
]
FND50_02205
Enzymes [BR:
rhwb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FND50_02205
DNA repair and recombination proteins [BR:
rhwb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FND50_02205
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
PRAP
Motif
Other DBs
NCBI-ProteinID:
QDQ89705
LinkDB
All DBs
Position
451449..452099
Genome browser
AA seq
216 aa
AA seq
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MSRATKPSAAPFVPDTVDLDALSHAADGCHGCDLYRDAEHTVFGAGRRSARMMLVGEQPG
DQEDRAGEPFVGPAGKLLNKALDAAGIDRNLTYVTNAVKHFKFVPAERGKRRIHKKPNRT
EIVACRPWLIAELAAVQPDVLVCLGATAAQALLGPSFRLTEHRGELLHLDGEVDVDVDPD
VFATIHPSAVLRGPSEDRDDAFDGLVADLKTAAAAL
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgcgccacgaagccctcggccgcaccgttcgtgccggacaccgtcgacctcgac
gcgttgtcccacgcggcggacgggtgccacggctgcgatctgtaccgcgacgccgagcac
accgtcttcggcgcgggcaggcgatccgcgcggatgatgctcgtcggtgaacagccaggc
gatcaagaagaccgcgccggtgaaccgttcgtcggcccggcgggaaagcttctgaacaag
gcgctcgacgcggcgggcatcgaccggaacctcacgtacgtcaccaacgccgtcaaacac
ttcaagttcgtccccgccgaacgcggcaagcgccgaatccacaagaagccgaaccgtacc
gagatcgtcgcgtgccggccgtggctgatcgccgaactggcggcggtgcaacccgacgtc
ctcgtgtgcctcggggccaccgccgcgcaggcgttgctcggcccgtcgttccggctcacc
gaacaccgcggagagttactgcacctcgacggcgaggtggacgtcgacgtggatccggac
gtcttcgcgacgatccacccgtccgccgtgctccgcggaccgtcggaggatcgggacgac
gcgttcgacggcctcgtcgccgacctgaaaacggccgctgccgcactctga
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