Rhodococcus sp. WB9: FND50_02970
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Entry
FND50_02970 CDS
T11350
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
rhwb Rhodococcus sp. WB9
Brite
KEGG Orthology (KO) [BR:
rhwb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhwb03400
]
FND50_02970
DNA repair and recombination proteins [BR:
rhwb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
FND50_02970
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Motif
Other DBs
NCBI-ProteinID:
QDQ89846
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All DBs
Position
complement(609200..609604)
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AA seq
134 aa
AA seq
DB search
MPATDPATSARMRAQRRRDTAPELALRRELHRRGVRYYVDRAPMKGVRRRADLVFPRRKV
AVYVDGCFWHSCPQHATFPKNNAQWWAEKLAGNVTRDRDTDTRLTDAGWTVVRIWEHENP
VVAANRVQEALADE
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccaccgatcccgcgaccagtgcccggatgcgagcgcagcggcgtcgcgacacc
gcacccgaactcgcactgcgccgggaactgcaccggcgcggggtccggtactacgtggac
cgggcgccgatgaagggcgtccggcggcgcgccgacctggtgtttccgcgacgaaaggtg
gccgtgtacgtggacgggtgcttctggcacagctgcccgcagcacgccacgttcccgaag
aacaacgcgcagtggtgggccgagaagctcgccgggaacgtcacccgcgatcgtgacacc
gacacgaggctgaccgacgccgggtggacggtggtgcggatctgggagcacgagaatccg
gtggtcgccgcgaacagggtccaggaagctctggccgacgagtga
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