Rhodococcus sp. WB9: FND50_03980
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Entry
FND50_03980 CDS
T11350
Name
(GenBank) DEAD/DEAH box helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
rhwb Rhodococcus sp. WB9
Brite
KEGG Orthology (KO) [BR:
rhwb00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
FND50_03980
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Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
WHD_HRQ1
Helicase_C
ResIII
LRR_RPS2
Motif
Other DBs
NCBI-ProteinID:
QDQ90020
LinkDB
All DBs
Position
complement(824018..826381)
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AA seq
787 aa
AA seq
DB search
MSTPFSPRDDSGNTGETYGRALLNRVLEGVPRDENPLTFAAEMPARTSQLSEWPAWAHPS
VVRAMQENGIPRPWTHQAAAADLARHGTNVVVSTGTASGKSLAYQLPVLTTLATDPRATA
LYLSPTKALGADQLRAVTSLIDSEVLDAGDDLRSVCPCVFDGDTPLEVRHWARENSRWLF
TNPDMLHISLLRTHQRWAHFFRNLAYVVIDECHSYRGVFGSNVALVLRRLRRIAARYGAD
PVFVLASATTADPGAAASRLIGAPCAEVVEDGSPHGPRTVALWEPPLMREVTGENGSPVR
RPAGSEAARIMADLMVEGARTLTFVRSRRGAELTAMATKRLLGEIDPELSARVASYRAGY
LAEDRRELETALADGTLLGAATTNALELGVDIAGLDAVVVAGFPGTVASFWQQGGRSGRR
GEGSLVVLIARDDPLDTYLVHHPSALLDKPVEATVTDPSNPYVLGPQLLCAAMELPLSDA
EAEAFGAIDVLGKLAEQGLIRRRAHGWFVTAGTNPHGAVDIRGGIGTQVAIVVSESGRML
GTVDTGRAPATAHPGAVHIHQGESYVVDELDLDQGLALVHAEDPDWTTSARETTEITVTS
VLEQKQFGDVEVALVEVEVTHQVIGYLRRLSSGEVLDAVELDMPRQTLPTRAVMYTITPE
LLVQAGVPAERVPGSLHAAEHAAIGLLPLVAVCDRGDIGGVSTALHADTGLPTVFVYDGH
AGGAGFADRGHAELTRWLGATREAIESCECTSGCPSCVYSPKCGNGNDPLDKDGAIRVLT
AVLASLG
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacaccgttttcaccacgtgacgacagtggaaatacgggcgaaacatacggccga
gcgctactgaaccgagtcctcgagggagttccccgagacgaaaacccgctcactttcgcc
gcggaaatgcctgcccggacttctcagctgtcggaatggccggcgtgggcgcacccgagc
gtcgtccgggccatgcaggagaacgggatcccccgcccctggacccatcaggccgccgcc
gccgacctggcccgtcacgggacgaacgtcgtggtgtcgaccggcaccgcctcgggcaag
tcgctggcctaccagcttccggtactcaccactctggcaacggatccgcgggcgaccgcc
ctctacctctccccgaccaaggcgctgggcgcagaccagctgcgggccgtgacctcgctc
atcgactcggaagtcctggatgccggggacgacctccggagcgtgtgcccgtgcgtgttc
gacggcgacaccccactcgaggtgcggcactgggcgagggagaactcgcggtggctcttc
acgaaccccgacatgctgcacatctccctcctccggacccatcagcgatgggcgcatttc
ttccgcaatctggcctacgtggtgatcgacgaatgccactcctaccgtggtgtcttcggc
tcgaatgtcgcgctcgtactgcggcggctccggcgcatcgcggcccggtacggcgccgat
cccgtcttcgtcctcgcgtccgccaccacggcggatcccggggcggcggcgtcgcggctg
atcggcgcgccctgcgccgaggtcgtggaagacggttcaccgcacggcccccggacggtc
gcgctgtgggaacccccgctcatgcgggaggtcaccggagagaacggaagccccgtacga
cggcccgccggttcggaggccgcgcgcatcatggccgacctgatggtcgaaggggcccgc
acgctcaccttcgtgcgctcccgccggggcgcggagctgaccgcgatggcgaccaaacgc
ctactcggggagatcgatcccgaactctcggcccgggtcgcgtcgtatcgagccgggtac
ctcgccgaggatcggcgtgagctcgagaccgcgctcgccgacggcacgctgctgggagcg
gcgacgacgaatgcgctcgagctcggcgtcgacatcgccggcctcgacgccgtcgtggtc
gccgggttccccggcacggtggcgtcgttctggcaacagggaggccgctccggccgacgc
ggcgaaggttcgctcgtagtcctgatcgcgcgtgacgatcccctcgacacctacctcgtc
caccacccgtccgcgctgctcgacaagcccgtcgaggcgaccgtcacggacccgagcaat
ccctacgtcctcggcccgcagttgctctgcgcggcaatggaactaccactgtccgacgcc
gaggccgaggcgttcggggcgatcgacgtcctcggaaagctggcggagcagggcctgatc
cgtcggcgcgcccacggctggttcgtcaccgccggcacaaatcctcatggcgcagtggat
atccggggtggaatcggtacccaggtggcaattgtcgtgtcggaatccggacgcatgctc
ggaaccgtcgacaccggccgcgctcccgccacggcgcatcccggcgccgtccacatccat
cagggtgagtcgtacgtcgtcgacgaactcgatctcgaccagggactcgccctggtgcac
gcggaggaccccgactggacgacctcggcccgcgagaccaccgagatcacggtcacctcc
gttctcgagcagaagcagttcggcgacgtcgaggtcgcgctcgtcgaggtcgaggtgacc
catcaggtgatcggatacctccgacgactgtcttcgggcgaggttctcgacgcggtcgaa
ctggacatgccgaggcagaccctccccacccgtgcggtgatgtacacgatcaccccggaa
cttctggtgcaggcgggtgttccggccgaacgcgtgcccggttcgctccacgccgccgaa
catgccgcgatcggcctcctgcctctcgtcgcggtgtgcgatcgaggcgacatcggcggc
gtctcgaccgcgttgcacgccgacaccggacttcccaccgtgttcgtctacgacggtcac
gcaggcggcgcaggattcgccgaccgaggtcacgccgaactcacccgatggctcggcgcg
acccgcgaggcgatcgaatcgtgcgaatgcacctcggggtgcccgtcctgcgtgtactca
ccgaagtgcggaaacggcaacgatcccctcgacaaggacggcgcgatccgggtcctcacg
gcggttctggcctcgctcggctga
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