Rhodococcus sp. WB9: FND50_06480
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Entry
FND50_06480 CDS
T11350
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
rhwb Rhodococcus sp. WB9
Brite
KEGG Orthology (KO) [BR:
rhwb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhwb03021
]
FND50_06480
Transcription machinery [BR:
rhwb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FND50_06480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
MarR_2
HTH_3
MarR
HTH_23
DUF7343
HTH_IclR
HTH_24
HTH_Crp_2
HTH_Tnp_4
DUF134
Motif
Other DBs
NCBI-ProteinID:
QDQ90474
LinkDB
All DBs
Position
complement(1361662..1362576)
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AA seq
304 aa
AA seq
DB search
MNVSTQLLAPSCEIRRIPPRTTPTRRTKPAAEVATDDRRLERPQAARGERDQYRDVPAQC
EAIGRLAASDPRREVLRQRLIERCLPLAEHIARRFHGRGEPLDDLIQVARLGLVKAVDRF
DARCGGNFVSYAVPTITGEVRRHFRDTGWAMRVPRSMQELHLSLTNATTDLTTTLGRAPT
ASELAEALGIDKDEVVQGLRVADAYSTLSVDFPLGENERPLSETIGDVDPALAHVEDHVV
LAPLLESLPDLERTVLVLRFFGNMTQSQIAARVGVSQMQVSRLLTKTLADLRGKLADVGG
QMLS
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgtccacccagctcctagcaccatcctgcgagatccgtcgcatccccccgagg
acgacgccgacgcgtcgcacgaagcctgcggcggaggtcgcaacagacgaccgacgactg
gaacgcccgcaagccgcgcgcggcgagcgcgaccagtaccgtgacgtgcccgcacagtgc
gaggccatcggccggctcgccgcctccgacccccgccgcgaagtgctgcgacagcgactg
atcgaacgttgcctgccgctcgccgaacacatcgcccggcgcttccacggtcgcggcgaa
ccactcgacgacctgatccaggtcgcccgcctcggtctggtcaaggccgtcgaccgcttc
gacgcccgctgcggagggaacttcgtgtcctacgccgtcccgaccatcaccggcgaggtg
cgcaggcacttccgcgacacgggctgggccatgcgcgtcccgcgcagcatgcaggaactg
cacctctccctcaccaacgcgacaaccgacctgaccacgacgctcggacgcgctccgacg
gcgagcgaactggccgaggccctcgggatcgacaaggacgaagtagtccaggggctccgg
gtcgccgacgcgtacagcaccctgtccgtcgatttcccgctcggtgagaacgaacgcccg
ctgtcggagacgatcggagacgtcgaccccgccctcgcccacgtcgaggaccacgtggtc
ctcgcacctctgctggaatcacttcccgatctcgaacgcactgtgctggttctgcgcttc
ttcggcaacatgacccagtcgcagatcgcagcgcgggtgggtgtctcgcagatgcaggtg
tctcggctcctgaccaagaccctggcggatctgcgcgggaaactcgccgacgtcggcggt
cagatgctctcgtag
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