Rhodococcus sp. WB9: FND50_18220
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Entry
FND50_18220 CDS
T11350
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
rhwb Rhodococcus sp. WB9
Pathway
rhwb03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rhwb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
FND50_18220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhwb03400
]
FND50_18220
DNA repair and recombination proteins [BR:
rhwb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
FND50_18220
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
QDQ92536
LinkDB
All DBs
Position
complement(3937436..3938332)
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AA seq
298 aa
AA seq
DB search
MERMRSIWKGSIAFGLVNVPVKVYSATEDHDIRFHQVHAKDGGRIKYNRVCSECGNVVQY
ADIDKAYDSDDGVRVVLTDDDFGKLPAAEKHEIPVLQFVPTEQIDPILFEKSYFLEPDSS
SPKAYVLLATALENSDRTALVHFTLRQRTRLAAMRSRDGVLVIQTLLWPDEVRAAEFSSL
DGVDKPKAKELAMAETLVDSMADDFDPTEFTDDYQVQLRELLDEMIESGGKKVIPVAEVE
KSGEDAEVVDLVAALQRSVDAAGKKAAPAKKKPAKKAPAKTAAKKATAKSSSSERKRA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggaacgcatgcggtcgatatggaagggctcgatagcgttcggactcgtgaatgtgccg
gtcaaggtctattcggcaaccgaggatcacgacatcaggtttcaccaggtccatgccaag
gacggcggccggatcaaatacaaccgcgtctgctccgaatgcggcaacgtcgtccaatac
gccgatatcgacaaggcctacgactccgacgacggcgtgcgcgtggtgttgacggacgat
gatttcgggaaactgcccgccgccgagaaacacgagattcccgttctgcagttcgtgccg
accgaacagatcgaccccattctgttcgagaagagttacttcctcgaaccggattcgagc
tctccgaaggcatatgtcctactcgcgacagccctcgagaacagtgaccgcacagccctc
gtccacttcactcttcggcagcgcacccgactcgccgcgatgcgttcccgggacggggtg
ctggtgatccagacgctgctgtggccggacgaggtacgcgccgcggaattctcctcactc
gacggcgtcgacaagccgaaggcgaaggaactcgcgatggccgagaccctcgtcgacagc
atggccgacgacttcgaccccaccgaattcaccgacgactaccaggtgcagttgcgtgaa
ctgctcgacgagatgatcgagtccggcggcaagaaggtcatccccgtcgccgaggtcgag
aagagcggcgaggacgccgaagtggtggatctcgtggccgcactgcagcgcagcgtcgac
gccgccgggaagaaggccgcacccgccaagaagaagccggcgaagaaggctccggccaag
accgcggcgaagaaggccacagcgaagtcatccagttcggaacgcaagcgcgcctga
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