Rhodococcus sp. WB9: FND50_22170
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Entry
FND50_22170 CDS
T11350
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
rhwb Rhodococcus sp. WB9
Brite
KEGG Orthology (KO) [BR:
rhwb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rhwb03051
]
FND50_22170 (pafA)
Enzymes [BR:
rhwb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
FND50_22170 (pafA)
Proteasome [BR:
rhwb03051
]
Prokaryotic proteasome
Bacterial regulatory particles
FND50_22170 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
QDQ93173
LinkDB
All DBs
Position
complement(4780694..4782037)
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AA seq
447 aa
AA seq
DB search
MGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGSHPEYA
TAECDNLIQLVNHDRAGERVLEELLIDAEQRLAEEGIGGDIYLFKNNTDSAGNSYGCHEN
FLVARAGEFSRISDVLLPFLVTRQLICGAGKVLQTPKAATFCLSQRAEHIWEGVSSATTR
SRPIINTRDEPHADAEKYRRLHVIVGDSNMSESTTMLKVGTAALVLEMIEAGVSFRDFAL
DNPIRAIREVSHDVTGRRPVRLAGGRQASALDIQREYHARAVEHLQNRDPDPQVTQVVDL
WGRMLDAVETQDFAKVDTEIDWVIKRKLFQRYQDRHGFELADPKIAQLDLAYHDIKRGRG
VFDVLQRKGLVKRITEDETIEAAVDTPPQTTRAKLRGEFITAAQEAGRDFTVDWVHLKLN
DQAQRTVLCKDPFRSVDERVERLIASM
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggaattgagacagagttcggtgtgacctgcaccttccatggtcacaggcgactgagc
ccggacgaggttgcgcgctacctgttccggcgggtggtgtcgtggggccggagctccaac
gtgtttctccggaacggtgcccgcctgtatctggacgtcggctcgcaccccgaatacgcg
acagccgagtgcgacaacctcatccagttggtcaaccacgaccgggcgggggagcgtgtt
ctcgaggagctgttgatcgacgccgaacagcggctcgccgaggaaggcatcggcggcgac
atctacctgttcaagaacaacacggactcggcgggcaattcgtacggctgtcacgagaac
ttcctggtggcccgagccggcgaattttcccggatctcggacgtgctgctcccgttcctg
gtgacgcggcagctgatctgtggcgcgggaaaggtcctgcagacgccgaaggcggccacg
ttctgcctgtcgcagcgcgccgagcacatctgggagggcgtgtcctcggcgaccacgcgg
tcgcggcccatcatcaacacccgtgacgagccgcacgccgacgcggagaagtaccgccgc
ctgcacgtgatcgtcggcgactcgaacatgtccgagtccaccacgatgctgaaggtgggc
acggcggcgctcgtgctcgagatgatcgaggccggggtgtcgttccgcgacttcgcgctc
gacaacccgatccgcgccatccgcgaggtcagccacgacgtcaccggacgccgcccggtg
cggctcgccggcggccggcaggccagcgccctcgacattcagcgggagtaccacgcgcgc
gccgtggaacacctgcagaaccgggatcccgatccgcaggtcactcaggtcgtcgacctg
tggggtcgcatgctcgacgccgtcgagacacaggacttcgcgaaggtcgacacggagatc
gactgggtcatcaagcgcaagctgttccagcgctatcaggaccggcacggcttcgagttg
gccgacccgaagatcgcgcagctggatctggcgtaccacgacatcaaacgcggtcgtggc
gtgttcgacgtgctgcagcgcaagggtctggtgaagcggatcaccgaggacgagacgatc
gaggcggcggtggacactccaccgcagacaactcgggcgaagctgcgcggcgagttcatc
acggcggcgcaggaggccggacgcgacttcacggtcgactgggtgcacctcaagctcaac
gaccaggcccagcggaccgtgctgtgcaaggaccccttccggtcggtcgacgagcgggtg
gagcggctgattgcctcgatgtag
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