Rhodococcus sp. WB9: FND50_25760
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Entry
FND50_25760 CDS
T11350
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rhwb Rhodococcus sp. WB9
Pathway
rhwb00300
Lysine biosynthesis
rhwb00470
D-Amino acid metabolism
rhwb01100
Metabolic pathways
rhwb01110
Biosynthesis of secondary metabolites
rhwb01120
Microbial metabolism in diverse environments
rhwb01230
Biosynthesis of amino acids
Module
rhwb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rhwb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FND50_25760 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FND50_25760 (lysA)
Enzymes [BR:
rhwb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
FND50_25760 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QDQ93829
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All DBs
Position
complement(5513994..5515415)
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AA seq
473 aa
AA seq
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MNAHPAGPKHAEQLHAPGLPERPADAAAFAALSPEVWPRNAHRAADGVVSLAGIPVTELA
EKYGTPLFVVDEDDFRSRCRDMARAFGPTAKVHYASKAFLCGEIARWVADEGLSLDVASG
GELAVALHAGFPAERIAMHGNNKSVAELNAAVSARVGHIVVDSATEIDRLDKVAAEAGVL
QDVLIRVTVGVEAHTHEFISTAHEDQKFGFSLAGGKAIDAVRRVFAADNLRLVGLHSHIG
SQIFDVDGFELAAHRVIGLLRDVVAEFGVDKTAQISIIDLGGGMGISYVPTDDPPPVDQL
AAKLGDIVRNESALAGLPEPTLAVEPGRAIAGPGTVTLYEVGTIKDVTVGANLTRRYVSV
DGGMSDNIRTALYQAEYEAKLVSRVSDAAPVVSRVVGKHCESGDVVIRDTWMPEDIDAGD
LLAVAATGAYCYSMSSRYNLLARPAVVAVRDGQSRVILRRETVEDLLSLEVQE
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcgcaccccgcaggtcccaagcacgccgaacagctgcacgcaccaggtctgccc
gaacgtcccgccgacgcggccgcattcgccgcactctctcccgaggtgtggccccgcaac
gcgcaccgcgccgcggatggagtcgtcagcctggcgggcatcccggtcaccgaactggcc
gagaagtacggcaccccattgttcgtggtcgacgaggacgatttccggtcccgctgccgc
gacatggcccgtgcgttcgggcccaccgccaaggtgcactacgcgtccaaggcgttcctg
tgcggcgagatcgcccgctgggtcgccgacgagggcctgtccctggacgtcgcgtcgggc
ggtgaactggcggtcgccctgcacgccggattcccggcggagcgaattgccatgcacggc
aacaacaaatcggtcgccgagctgaacgccgccgtgtcggcccgggtcgggcacatcgtg
gtcgactccgccacggagatcgaccgcctcgacaaggtggccgccgaagccggtgtgctg
caggacgttctgatccgcgtgacggtcggagtcgaggcacacacccacgaattcatctcc
acggcccacgaggaccagaagttcgggttctcgctcgcgggcggaaaggcgatcgacgcg
gtccgccgggtcttcgccgccgacaatctgcggctggtcggactccacagccacatcggc
tcgcagatcttcgacgtcgacggcttcgagttggccgcacaccgcgtgatcgggctgctg
cgggacgtcgtcgcggagttcggcgtggacaagaccgcccagatctcgatcatcgacctc
ggcggcggcatgggaatctcctacgtccccaccgacgacccgccgccggtcgaccagctc
gccgccaaactcggcgacatcgtgcgcaacgagtcggcgctcgccggtctgccggagccg
acgctggccgtcgaacccggacgcgcgatcgccggacccggcacggtgacgctgtacgag
gtcggcaccatcaaggacgtcaccgtcggcgccaacctcacccgccggtacgtcagcgtc
gacggcggaatgagcgacaacatccgtaccgcgctgtaccaggcggagtacgaggccaaa
ctggtctcgcgggtcagcgacgcggcaccggtggtgtcccgcgtcgtcggtaagcactgc
gagtccggcgacgtcgtgatccgcgacacctggatgcccgaggacatcgacgccggcgat
ttgctcgccgtcgcggccaccggtgcatactgctattcgatgtcgagcaggtacaacctg
ctcgcccgccctgccgtggtggcggtgcgcgacggacagtcgcgcgtgatcctccggagg
gaaaccgtggaagacctgctgagcttggaggtacaggagtga
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