Rhodococcus sp. WB9: FND50_26125
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Entry
FND50_26125 CDS
T11350
Name
(GenBank) DEAD/DEAH box helicase
Organism
rhwb Rhodococcus sp. WB9
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
QDQ93895
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All DBs
Position
complement(5587312..5590143)
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AA seq
943 aa
AA seq
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MLHGLWTPGSGLMLWVEDRNPAAEEPTDAVGRVLARKFRHHVKVPMPTPSGPEMLEWAAV
ALAPPDATEFLLSVSARDPRVAGDLRYLAHVARGVERWARAGRVVPEVHRAEGGWWPRWR
LLGGERQRAWLTELAVAMPPVQRHGTTPRAVLDDMVTELTDPVARRVLERRHPDDSATDA
DHPLIEALLRGDQFDEGTAQLSGSLDGWRDSLKVDEPELVLRLLEPEDVDVEGDWDPDAV
LWRLEVCLRPEGEAPVPIPLHHTEASRLQIGVRKLTEAVAAYPRLQDVPSDPDSLDLMLP
TAVVIDLVGHGAVALKEKGISLLLPRAWSVASPSMRLRVSSPSTPASAENRAVGKDQLVQ
YNWELALGDTVLTAAEMNRLVNSKSDLVRLRGEWVRADQEVLSRAARYVAERHASGDRAI
VDLLKDLIADDLSDLPVEEVTATGWAAALLDSDTKPQVVPIPDGLDATLRPYQKRGLDWL
VFMSRLGLGAVLADDMGLGKTLQLLALLAHETAATPTLLVCPMSVVGNWQREAARFVPSL
RVLVHHGPQRLSGEDFTAAVTQSDLVITTYALLARDVAHLKEQDWRRVVLDEAQHIKNAK
TSQARAARSIPAAHRVALTGTPVENRLDELRSILDFANSGILGSEAMFRKRFVVPIEREQ
DEAAVARLRAVTSPFVLRRVKTDPAVIADLPDKFEMTVRANLTAEQAALYRAVVDDMMAQ
IKDKKGMKRKGAVLAALTKLKQVCNHPAHFLRDGSAVMRRGQHRSGKLGLVEDILDSVVA
DGEKALLFTQFREFGDLVTPYLAERFGTPVPFLHGGVSKQKRDDMVASFQGDDGPPIMML
SLKAGGTGLNLTAANHVVHLDRWWNPAVENQATDRAFRIGQRRDVQVRKLVCVGTLEERI
DAMIATKQELADLAVGTGENWVTEMSTEQLGELLRLGDEAVGE
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacggcctctggacaccgggttcgggtctcatgctgtgggtggaggaccggaat
ccggccgccgaggagccgacggatgcggtcgggcgggtgctggcacggaagttccggcat
cacgtgaaggtgccgatgccgacgccgtcggggccggagatgctcgagtgggccgcggtc
gcgctcgcaccgccggacgcgacggagtttctgctgtcggtgtcggcccgcgacccccgg
gtcgccggggatctgcgctacctcgcccacgtcgcccgcggtgtcgagcggtgggcacgc
gccggccgggtggtgcccgaggtgcaccgcgcggagggcggctggtggccgcgctggcgg
ctgctcggcggtgagcggcagcgtgcgtggctcacggagctggccgtcgcgatgccgccg
gtccagcgtcacggcacgaccccccgagctgtgctcgacgacatggtcaccgagctgacc
gaccccgtcgcccgccgtgtcctcgaacgccggcatccggacgattccgccaccgacgcg
gaccatccgctgatcgaagcgctgctgcgcggcgaccagttcgacgagggcaccgcccag
ctgtcgggttcgctggacgggtggcgcgacagcctcaaagtggacgaaccagaactggtg
ctgcggctcctcgagccggaagacgttgacgtggagggggactgggatccggacgcggtg
ctgtggcgactggaggtctgtcttcgtccggaaggcgaagcgccggtgccgattccgttg
catcacacggaggcgagtcgcctgcagatcggggtgcgcaagctgacggaggccgtggcc
gcctacccgcgactgcaggacgtccccagtgatcccgacagcctggacctgatgttgccc
accgccgtggtcatcgacctcgtcggacacggtgcggtggcgttgaaggagaagggcatc
agcctgctgctgccgcgggcgtggagtgtggcgtcgccgtcgatgcgcctgagggtgagc
tcgccgagcactccggcgagcgcggagaaccgggctgtcggcaaagaccagttggtgcag
tacaactgggaactggcgctcggcgacacggtgctcaccgccgcggagatgaatcgactg
gtcaactcgaagagtgatctcgtgcggttgcgcggcgagtgggtgagggcggatcaggag
gtgctctcccgcgccgcgcggtacgtggcggagcggcacgcgagcggcgaccgggccatc
gtggacctgctgaaggacctgatcgcggacgatctctccgaccttcccgtcgaggaggtc
acggccaccggctgggcggccgcgttgctggacagcgacacgaagccgcaggtagtgccg
atcccggacgggttggacgcgacgctgcgcccgtatcagaagcggggactcgactggctg
gtcttcatgagccgcctcggcctcggcgccgtcctcgccgacgacatgggtctcggcaag
acactgcagttgctcgcactgctggcacacgagaccgccgcgacacccaccttgctggtg
tgcccgatgtcggtggtcggcaactggcagcgcgaggcggcacgcttcgttccctcgctg
cgggtgctcgtccaccacggtccgcagcggctgagcggtgaggacttcaccgccgccgtg
acgcagagcgatctggtgatcaccacgtacgcgctgctggcccgcgacgtcgcgcacctg
aaggagcaggactggcggcgtgtcgtgctggacgaggcgcagcacatcaagaacgcgaag
acgtcgcaggcgcgggcggcgcggagcattccggcggcgcaccgcgtcgcgctgacgggc
actccggtcgagaaccggctcgacgaactgcgctcgatcctcgacttcgcgaactcgggc
atccttggctcggaggcgatgttccgcaagcgcttcgtggtgcccatcgagcgggagcag
gacgaggcggccgtcgcccggctccgcgccgtcacgtcgccgttcgtgctgcgccgcgtc
aagaccgatcccgcggtcatcgccgacctcccggacaagttcgagatgacggtccgtgcc
aacctcacagccgagcaggccgcgctgtaccgggcggtggtcgacgacatgatggcgcag
atcaaggacaagaaggggatgaagcgcaagggggccgtcctcgccgccctgacgaaactc
aagcaggtgtgcaaccacccggcacacttcctgcgcgacgggtcggcggtgatgcggcgc
ggacagcaccgctccggcaagctggggctcgtcgaagacatcctggactcggtggtcgcg
gacggcgagaaggcgttgctgttcacccagttccgggaattcggcgacctcgtgaccccg
tacctcgcggagcgtttcggtacccccgtgccgtttctgcacgggggcgtctccaagcag
aaacgcgacgacatggtggcctcgttccagggggacgacgggccgccgatcatgatgctc
tcgctgaaggcgggcgggacgggcctgaacctcaccgcggccaatcacgtcgttcacctc
gaccggtggtggaacccggcggtcgagaaccaggccacggaccgggcgttccggatcggt
cagcggcgggacgtgcaggtgcgcaagctcgtgtgcgtcggcaccctggaggagcggatc
gacgcgatgatcgccaccaagcaggagctggcggatctcgccgtcgggacgggcgagaac
tgggtgacggaaatgagcaccgagcaactcggtgaactgctgcggctcggcgacgaggcg
gtgggcgaatga
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